Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPS3A
  • Mouse genes Rps3a1
  • Rat genes LOC100365839,Rps3a
  • Zfish genes rps3a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rps3a1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0048027	mRNA 5'-UTR binding	RPS3A	IDA		Human	PMID:16213212
Molecular Function	GO:0003729	mRNA binding	Rps3a	IDA		Rat	PMID:7338522|RGD:11040966
Molecular Function	GO:0005515	protein binding	RPS3A	IPI	UniProtKB:Q8VI75	Human	PMID:11823430
Molecular Function	GO:0005515	protein binding	RPS3A	IPI	UniProtKB:P07900	Human	PMID:16169070
Molecular Function	GO:0005515	protein binding	RPS3A	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	RPS3A	IPI	UniProtKB:P07900	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPS3A	IPI	UniProtKB:P62263	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RPS3A	IPI	UniProtKB:P62263	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	Rps3a1	IPI	UniProtKB:P35639	Mouse	MGI:MGI:3687785|PMID:10713066
Molecular Function	GO:0005515	protein binding	Rps3a	IPI	UniProtKB:Q9R0N3	Rat	PMID:24882364|RGD:8693368
Molecular Function	GO:0003723	RNA binding	RPS3A	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RPS3A	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPS3A	HDA		Human	PMID:15883184
Molecular Function	GO:0003735	structural constituent of ribosome	RPS3A	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	Rps3a1	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Molecular Function	GO:0031369	translation initiation factor binding	Rps3a	IPI	UniProtKB:P68101	Rat	PMID:3384085|RGD:8554720
Cellular Component	GO:0005737	cytoplasm	RPS3A	IDA		Human	PMID:11823430
Cellular Component	GO:0005737	cytoplasm	RPS3A	HDA		Human	PMID:16791210
Cellular Component	GO:0005829	cytosol	RPS3A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	Rps3a1	IDA		Mouse	MGI:MGI:3687785|PMID:10713066
Cellular Component	GO:0022626	cytosolic ribosome	RPS3A	IDA		Human	PMID:23636399
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS3A	HDA		Human	PMID:15883184
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS3A	IDA		Human	PMID:8706699
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps3a1	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps3a	IDA		Rat	PMID:2328735|RGD:1599573
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps3a	IDA		Rat	PMID:6196023|RGD:2299087
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps3a	IDA		Rat	PMID:925037|RGD:2300014
Cellular Component	GO:0005783	endoplasmic reticulum	RPS3A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070062	extracellular exosome	RPS3A	HDA		Human	PMID:20458337
Cellular Component	GO:0005925	focal adhesion	RPS3A	HDA		Human	PMID:21423176
Cellular Component	GO:0005730	nucleolus	RPS3A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	RPS3A	IDA		Human	PMID:15572026
Cellular Component	GO:0005730	nucleolus	RPS3A	HDA		Human	PMID:16791210
Cellular Component	GO:0005634	nucleus	RPS3A	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	Rps3a1	IDA		Mouse	MGI:MGI:3687785|PMID:10713066
Cellular Component	GO:0005634	nucleus	Rps3a	IDA		Rat	PMID:8877097|RGD:11040965
Cellular Component	GO:1990904	ribonucleoprotein complex	RPS3A	IDA		Human	PMID:17289661
Cellular Component	GO:1990904	ribonucleoprotein complex	RPS3A	IDA		Human	PMID:18809582
Cellular Component	GO:0015935	small ribosomal subunit	Rps3a	IDA		Rat	PMID:3384085|RGD:8554720
Cellular Component	GO:0045202	synapse	Rps3a1	IDA		Mouse	PMID:16635246
Cellular Component	GO:0045202	synapse	Rps3a1	EXP		Mouse	PMID:16635246
Biological Process	GO:0043009	chordate embryonic development	rps3a	IMP	ZFIN:ZDB-MRPHLNO-070326-2	Zfish	PMID:17183665
Biological Process	GO:0043066	negative regulation of apoptotic process	RPS3A	IMP		Human	PMID:9566973
Biological Process	GO:0048146	positive regulation of fibroblast proliferation	Rps3a	IMP		Rat	PMID:8877097|RGD:11040965
Biological Process	GO:0045727	positive regulation of translation	Rps3a	IDA		Rat	PMID:8877097|RGD:11040965
Biological Process	GO:0045471	response to ethanol	Rps3a	IEP		Rat	PMID:1448059|RGD:10769365
Biological Process	GO:0006412	translation	RPS3A	IMP		Human	PMID:8877097

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern