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Rps3a1 Gene Detail
Summary
  • Symbol
    Rps3a1
  • Name
    ribosomal protein S3A1
  • Synonyms
    Rps3a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1202063
    NCBI Gene: 20091
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:86045247-86049975 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 37.83 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    298 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1202063
 protein coding gene Chr3:86045247-86050009 (-)
129S1/SvImJ ENSMUSG00200036128
 protein coding gene Chr3:82880950-82885630 (-)
A/J ENSMUSG00195051311
 protein coding gene Chr3:82906254-82910933 (-)
AKR/J ENSMUSG00220044007
 protein coding gene Chr3:82852618-82857398 (-)
BALB/cJ ENSMUSG00180046271
 protein coding gene Chr3:83022200-83026980 (-)
C3H/HeJ ENSMUSG00175038199
 protein coding gene Chr3:82833029-82837708 (-)
C57BL/6NJ ENSMUSG00215047644
 protein coding gene Chr3:83287234-83291996 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025125
 protein coding gene Chr3:78907127-78910939 (-)
CAST/EiJ ENSTCUG00005001666
 protein coding gene Chr3:82376820-82381591 (-)
CBA/J ENSMUSG00210045205
 protein coding gene Chr3:82977266-82981945 (-)
DBA/2J ENSMUSG00185051643
 protein coding gene Chr3:83111068-83115850 (-)
FVB/NJ ENSMUSG00205006063
 protein coding gene Chr3:81909887-81914650 (-)
JF1/MsJ no annotation
LP/J ENSMUSG00230033062
 protein coding gene Chr3:85101340-85106019 (-)
NOD/ShiLtJ ENSMUSG00190029161
 protein coding gene Chr3:83369465-83374229 (-)
NZO/HlLtJ ENSMUSG00225006263
 protein coding gene Chr3:87837374-87842128 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    RPS3A, ribosomal protein S3A
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPS3A, ribosomal protein S3A
  • Synonyms
    eS1, FTE1, MFTL, S3A
  • Links
    NCBI Gene ID: 6189
    UniProt: P61247

  • Chr Location
    4q31.3; chr4:151099565-151104652 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Gene trapped
    4
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Rps3a1
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
    8 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    60
  • GO References
    13
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    602
  • Tissues
    2
  • cDNA Data
    993
  • Literature Summary
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 20091 NCBI Gene Model | MGI Sequence Detail 4729 C57BL/6J ±  kb
transcript NM_016959 RefSeq | MGI Sequence Detail 960 Not Specified  
polypeptide P97351 UniProt | EBI | MGI Sequence Detail 264 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 996
    Genomic 1
    cDNA 994
    Primer pair 1
    Antibodies 1

    Microarray probesets 5
References
more
  • Summaries
    All 62
    Developmental Gene Expression 5
    Diseases 1
    Gene Ontology 13
    Phenotypes 8
  • Earliest
    J:115378 Lutsch G, et al., Immunoelectron microscopic studies on the location of ribosomal proteins on the surface of the 40S ribosomal subunit from rat liver. Eur J Cell Biol. 1990 Feb;51(1):140-50
  • Latest
    J:380905 Yang Y, et al., TRIM27 cooperates with STK38L to inhibit ULK1-mediated autophagy and promote tumorigenesis. EMBO J. 2022 Jul 18;41(14):e109777
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory