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Rps3a1 Gene Detail
Summary
  • Symbol
    Rps3a1
  • Name
    ribosomal protein S3A1
  • Synonyms
    Rps3a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1202063
    NCBI Gene: 20091
  • Gene Overview
    MyGene.info: RPS3A
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:86137940-86142668 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 37.83 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    76 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1202063
protein coding gene Chr3:86137940-86142702 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027353
protein coding gene Chr3:86172246-86176914 (-)
A/J MGP_AJ_G0027317
protein coding gene Chr3:83260827-83265496 (-)
AKR/J MGP_AKRJ_G0027283
protein coding gene Chr3:85258141-85262919 (-)
BALB/cJ MGP_BALBcJ_G0027326
protein coding gene Chr3:83343871-83350262 (-)
C3H/HeJ MGP_C3HHeJ_G0027070
protein coding gene Chr3:85557335-85562005 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027772
protein coding gene Chr3:89357635-89362426 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025125
protein coding gene Chr3:78907127-78910939 (-)
CAST/EiJ MGP_CASTEiJ_G0026517
protein coding gene Chr3:85762347-85770274 (-)
CBA/J MGP_CBAJ_G0027045
protein coding gene Chr3:92348063-92352730 (-)
DBA/2J MGP_DBA2J_G0027181
protein coding gene Chr3:82754884-82759603 (-)
FVB/NJ MGP_FVBNJ_G0027149
protein coding gene Chr3:81059941-81064703 (-)
LP/J MGP_LPJ_G0027289
protein coding gene Chr3:87109488-87114156 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027168
protein coding gene Chr3:98621392-98626999 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027830
protein coding gene Chr3:85040041-85045575 (-)
PWK/PhJ MGP_PWKPhJ_G0026251
protein coding gene Chr3:82569495-82574580 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026067
protein coding gene Chr3:84199541-84215493 (-)
WSB/EiJ MGP_WSBEiJ_G0026595
protein coding gene Chr3:85408448-85414981 (-)



Homology
more
  • Human Ortholog
    RPS3A, ribosomal protein S3A
  • Vertebrate Orthologs
    7
  • Human Ortholog
    RPS3A, ribosomal protein S3A
    Orthology source: HGNC
  • Synonyms
    FTE1, MFTL, S3A
  • Links
    NCBI Gene ID: 6189
    neXtProt AC: NX_P61247
    UniProt: P61247

  • Chr Location
    4q31.3; chr4:151099573-151104652 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Gene trapped
    4
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Rps3a1
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 20091 NCBI Gene Model | MGI Sequence Detail 4729 C57BL/6J ±  kb
transcript NM_016959 RefSeq | MGI Sequence Detail 960 Not Specified  
polypeptide P97351 UniProt | EBI | MGI Sequence Detail 264 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 995
    Genomic 1
    cDNA 994

    Microarray probesets 5
References
more
  • Summaries
    All 48
    Developmental Gene Expression 5
    Diseases 1
    Gene Ontology 8
    Phenotypes 7
  • Earliest
    J:115378 Lutsch G, et al., Immunoelectron microscopic studies on the location of ribosomal proteins on the surface of the 40S ribosomal subunit from rat liver. Eur J Cell Biol. 1990 Feb;51(1):140-50
  • Latest
    J:245730 Bardot P, et al., The TAF10-containing TFIID and SAGA transcriptional complexes are dispensable for early somitogenesis in the mouse embryo. Development. 2017 Oct 15;144(20):3808-3818

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory