Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPS18
  • Mouse genes Rps18
  • Rat genes Rps18,Rps18l1
  • Zfish genes rps18
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rps18

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPS18	IPI	UniProtKB:Q8IWS0	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	RPS18	IPI	UniProtKB:Q5S007	Human	PMID:24725412
Molecular Function	GO:0005515	protein binding	RPS18	IPI	UniProtKB:Q5S007	Human	PMID:31046837
Molecular Function	GO:0005515	protein binding	Rps18	IPI	UniProtKB:P70677|UniProtKB:P97864	Mouse	MGI:MGI:5306569|PMID:19759058
Molecular Function	GO:0005515	protein binding	Rps18l1	IPI	UniProtKB:Q9R0N3	Rat	PMID:24882364|RGD:8693368
Molecular Function	GO:0005515	protein binding	Rps18	IPI	UniProtKB:Q9R0N3	Rat	PMID:24882364|RGD:8693368
Molecular Function	GO:0019901	protein kinase binding	Rps18	IPI	RGD:2263	Rat	PMID:12145273|RGD:1300474
Molecular Function	GO:0003723	RNA binding	RPS18	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RPS18	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPS18	HDA		Human	PMID:15883184
Molecular Function	GO:0003735	structural constituent of ribosome	RPS18	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	Rps18	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0005829	cytosol	RPS18	IDA		Human	GO_REF:0000052
Cellular Component	GO:0022626	cytosolic ribosome	RPS18	IDA		Human	PMID:23636399
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS18	HDA		Human	PMID:15883184
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS18	IDA		Human	PMID:8706699
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps18	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps18	IDA		Rat	PMID:925037|RGD:2300014
Cellular Component	GO:0070062	extracellular exosome	RPS18	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	RPS18	HDA		Human	PMID:20458337
Cellular Component	GO:0005925	focal adhesion	RPS18	HDA		Human	PMID:21423176
Cellular Component	GO:0016020	membrane	RPS18	HDA		Human	PMID:19946888
Cellular Component	GO:0005634	nucleus	RPS18	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	RPS18	IDA		Human	PMID:22720776
Cellular Component	GO:0014069	postsynaptic density	RPS18	EXP		Human	PMID:21170055
Cellular Component	GO:0014069	postsynaptic density	RPS18	IDA		Human	PMID:21170055
Cellular Component	GO:0015935	small ribosomal subunit	RPS18	HDA		Human	PMID:15883184
Cellular Component	GO:0045202	synapse	Rps18	EXP		Mouse	PMID:16452087
Cellular Component	GO:0045202	synapse	Rps18	IDA		Mouse	PMID:16452087
Biological Process	GO:0051726	regulation of cell cycle	rps18	IMP	ZFIN:ZDB-GENO-020430-23	Zfish	PMID:15138505

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern