Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPL17
  • Mouse genes Rpl17
  • Rat genes Rpl17
  • Zfish genes rpl17
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpl17

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070180	large ribosomal subunit rRNA binding	Rpl17	IDA		Rat	PMID:6759166|RGD:11038795
Molecular Function	GO:0005515	protein binding	RPL17	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	Rpl17	IPI	UniProtKB:O41974	Mouse	MGI:MGI:5787727|PMID:26581985
Molecular Function	GO:0003723	RNA binding	RPL17	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RPL17	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPL17	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	RPL17	IDA		Human	PMID:32669547
Molecular Function	GO:0003735	structural constituent of ribosome	Rpl17	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0031672	A band	Rpl17	IDA		Rat	PMID:2188648|RGD:11036104
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL17	IPI		Human	PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL17	HDA		Human	PMID:12962325
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL17	IDA		Human	PMID:32669547
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl17	IPI		Mouse	MGI:MGI:6810796|PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl17	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl17	IDA		Rat	PMID:1894596|RGD:11036075
Cellular Component	GO:0022626	cytosolic ribosome	RPL17	IDA		Human	PMID:23636399
Cellular Component	GO:0005634	nucleus	RPL17	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	Rpl17	IDA		Rat	PMID:8144559|RGD:1304507
Cellular Component	GO:0005844	polysome	Rpl17	IDA		Rat	PMID:8144559|RGD:1304507
Cellular Component	GO:0045202	synapse	Rpl17	IDA		Mouse	PMID:25211037
Cellular Component	GO:0045202	synapse	Rpl17	EXP		Mouse	PMID:25211037
Cellular Component	GO:0045202	synapse	Rpl17	IDA		Mouse	PMID:16452087
Cellular Component	GO:0045202	synapse	Rpl17	EXP		Mouse	PMID:16452087
Biological Process	GO:0034198	cellular response to amino acid starvation	Rpl17	IEP		Rat	PMID:8144559|RGD:1304507
Biological Process	GO:1900087	positive regulation of G1/S transition of mitotic cell cycle	Rpl17	IMP		Rat	PMID:23065385|RGD:11035308
Biological Process	GO:1990928	response to amino acid starvation	Rpl17	IEP		Rat	PMID:7765311|RGD:11036105

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern