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Rpl17 Gene Detail
Summary
  • Symbol
    Rpl17
  • Name
    ribosomal protein L17
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448270
    NCBI Gene: 319195
  • Gene Overview
    MyGene.info: RPL17
Location & Maps
more
  • Sequence Map
    Chr18:75000477-75003381 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      2905 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 50.96 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    RPL17, ribosomal protein L17
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RPL17, ribosomal protein L17
    Orthology source: HomoloGene, HGNC
  • Synonyms
    L17, PD-1, RPL23
  • Links
    NCBI Gene ID: 6139
    neXtProt AC: NX_P18621

  • Chr Location
    18q21; chr18:49488481-49492565 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Gene trapped
    1
  • Targeted
    2
  • Transposon induced
    1
  • Genomic Mutations
    1 involving Rpl17
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000062328 Ensembl Gene Model | MGI Sequence Detail 2905 C57BL/6J ±  kb
transcript ENSMUST00000079716 Ensembl | MGI Sequence Detail 775 Not Applicable  
polypeptide ENSMUSP00000078654 Ensembl | MGI Sequence Detail 184 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    131 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000014196 60S ribosomal protein L17
  • InterPro Domains
    IPR001063 Ribosomal protein L22/L17
    IPR018260 Ribosomal protein L22/L17, conserved site
    IPR005721 Ribosomal protein L22/L17, eukaryotic/archaeal
Molecular
Reagents
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  • All nucleic 553
    cDNA 553

    Microarray probesets 17
References
more
  • Summaries
    All 29
    Developmental Gene Expression 4
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:233627 Salinas E, et al., Identification of Viral and Host Proteins That Interact with Murine Gammaherpesvirus 68 Latency-Associated Nuclear Antigen during Lytic Replication: a Role for Hsc70 in Viral Replication. J Virol. 2016 Feb;90(3):1397-413

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory