Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPL13
  • Mouse genes Rpl13
  • Rat genes LOC100360491,LOC100361259,Rpl13
  • Zfish genes rpl13
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpl13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:P16333	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:P27986	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:Q15554	Human	PMID:21044950
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:Q5S007	Human	PMID:24725412
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:Q8NHQ1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:P42858	Human	PMID:25959826
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:Q96DV4	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:Q96DV4	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:Q5S007	Human	PMID:31046837
Molecular Function	GO:0005515	protein binding	RPL13	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	RPL13	HDA		Human	PMID:22658674
Molecular Function	GO:0003735	structural constituent of ribosome	RPL13	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	RPL13	IMP		Human	PMID:31630789
Molecular Function	GO:0003735	structural constituent of ribosome	RPL13	IDA		Human	PMID:32669547
Molecular Function	GO:0003735	structural constituent of ribosome	Rpl13	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0005829	cytosol	RPL13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	RPL13	IMP		Human	PMID:31630789
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL13	IPI		Human	PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL13	HDA		Human	PMID:12962325
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL13	IDA		Human	PMID:32669547
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl13	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl13	IPI		Mouse	MGI:MGI:6810796|PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl13	IDA		Rat	PMID:8198561|RGD:633815
Cellular Component	GO:0022626	cytosolic ribosome	RPL13	IDA		Human	PMID:23636399
Cellular Component	GO:0005783	endoplasmic reticulum	RPL13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	RPL13	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	RPL13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RPL13	HDA		Human	PMID:21630459
Cellular Component	GO:0045202	synapse	Rpl13	IDA		Mouse	PMID:25211037
Cellular Component	GO:0045202	synapse	Rpl13	EXP		Mouse	PMID:25211037
Biological Process	GO:0001824	blastocyst development	Rpl13	IMP		Mouse	PMID:26902285
Biological Process	GO:0060348	bone development	RPL13	IMP		Human	PMID:31630789
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	rpl13	IMP	ZFIN:ZDB-GENO-210402-8	Zfish	PMID:32916022
Biological Process	GO:0097421	liver regeneration	Rpl13	IEP		Rat	PMID:6121318|RGD:11038709
Biological Process	GO:0051726	regulation of cell cycle	rpl13	IMP	ZFIN:ZDB-GENO-040622-6	Zfish	PMID:15138505

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern