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Rpl13 Gene Detail
Summary
  • Symbol
    Rpl13
  • Name
    ribosomal protein L13
  • Synonyms
    L13
  • Feature Type
    protein coding gene
  • IDs
    MGI:105922
    NCBI Gene: 270106
  • Gene Overview
    MyGene.info: RPL13
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:123102350-123105244 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 72.05 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    68 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_105922
protein coding gene Chr8:123102350-123105244 (.)
129S1/SvImJ MGP_129S1SvImJ_G0034241
protein coding gene Chr8:126696244-126699125 (+)
A/J MGP_AJ_G0034221
protein coding gene Chr8:121447351-121450158 (+)
AKR/J MGP_AKRJ_G0034148
protein coding gene Chr8:124984740-124987547 (+)
BALB/cJ MGP_BALBcJ_G0034215
protein coding gene Chr8:121645098-121648476 (+)
C3H/HeJ MGP_C3HHeJ_G0033925
protein coding gene Chr8:125682186-125685075 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034734
protein coding gene Chr8:130932462-130937781 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031676
protein coding gene Chr8:114266182-114269036 (+)
CAST/EiJ MGP_CASTEiJ_G0033253
protein coding gene Chr8:125766347-125769251 (+)
CBA/J MGP_CBAJ_G0033898
protein coding gene Chr8:135719664-135725805 (+)
DBA/2J MGP_DBA2J_G0034055
protein coding gene Chr8:120629218-120632112 (+)
FVB/NJ MGP_FVBNJ_G0033998
protein coding gene Chr8:119782992-119785886 (+)
LP/J MGP_LPJ_G0034144
protein coding gene Chr8:126829686-126832582 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034045
protein coding gene Chr8:137866483-137869966 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034753
protein coding gene Chr8:125164523-125168760 (+)
PWK/PhJ MGP_PWKPhJ_G0032954
protein coding gene Chr8:120458079-120461205 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032794
protein coding gene Chr8:123897234-123900115 (+)
WSB/EiJ MGP_WSBEiJ_G0033369
protein coding gene Chr8:125923240-125925997 (+)



Homology
more
  • Human Ortholog
    RPL13, ribosomal protein L13
  • Vertebrate Orthologs
    11
  • Human Ortholog
    RPL13, ribosomal protein L13
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BBC1, D16S444E, D16S44E, L13
  • Links
    NCBI Gene ID: 6137
    neXtProt AC: NX_P26373
    UniProt: P26373

  • Chr Location
    16q24.3; chr16:89560657-89566829 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 270106 NCBI Gene Model | MGI Sequence Detail 2895 C57BL/6J ±  kb
transcript NM_016738 RefSeq | MGI Sequence Detail 794 C57BL/6  
polypeptide P47963 UniProt | EBI | MGI Sequence Detail 211 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 14
Other
Accession IDs
less
MGD-MRK-33599
References
more
  • Summaries
    All 32
    Developmental Gene Expression 5
    Gene Ontology 6
    Phenotypes 1
  • Earliest
    J:31514 Meyuhas O, et al., Construction and identification of cDNA clones for mouse ribosomal proteins: application for the study of r-protein gene expression. Gene. 1980 Jul;10(2):113-29
  • Latest
    J:239387 Stafford DA, et al., Deletion of the sclerotome-enriched lncRNA PEAT augments ribosomal protein expression. Proc Natl Acad Sci U S A. 2017 Jan 03;114(1):101-106

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory