Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RCN3
  • Mouse genes Rcn3
  • Rat genes Rcn3
  • Zfish genes rcn3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rcn3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	RCN3	IDA		Human	PMID:16433634
Molecular Function	GO:0005515	protein binding	RCN3	IPI	UniProtKB:Q9UMX1	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RCN3	IPI	UniProtKB:P29122	Human	PMID:16433634
Molecular Function	GO:0005515	protein binding	RCN3	IPI	UniProtKB:O95983	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCN3	IPI	UniProtKB:Q8N7B6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCN3	IPI	UniProtKB:A0A024R8L2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RCN3	IPI	UniProtKB:O95983-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RCN3	IPI	UniProtKB:P41227	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RCN3	IPI	UniProtKB:Q8IW40	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RCN3	IPI	UniProtKB:Q8TAU3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RCN3	IPI	UniProtKB:Q9UMX1	Human	PMID:32296183
Cellular Component	GO:0005783	endoplasmic reticulum	RCN3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	RCN3	IDA		Human	PMID:16433634
Cellular Component	GO:0005783	endoplasmic reticulum	Rcn3	IDA		Mouse	MGI:MGI:6201885|PMID:26252542
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	RCN3	IDA		Human	GO_REF:0000052
Biological Process	GO:0032964	collagen biosynthetic process	RCN3	IMP		Human	PMID:28939891
Biological Process	GO:0036503	ERAD pathway	Rcn3	IMP		Mouse	MGI:MGI:6201885|PMID:26252542
Biological Process	GO:0060428	lung epithelium development	Rcn3	IMP		Mouse	MGI:MGI:6201885|PMID:26252542
Biological Process	GO:0055091	phospholipid homeostasis	Rcn3	IMP		Mouse	MGI:MGI:6201885|PMID:26252542
Biological Process	GO:0010952	positive regulation of peptidase activity	RCN3	IMP		Human	PMID:28939891
Biological Process	GO:0009306	protein secretion	RCN3	IMP		Human	PMID:16433634
Biological Process	GO:0015031	protein transport	Rcn3	IMP		Mouse	MGI:MGI:6201885|PMID:26252542
Biological Process	GO:0051896	regulation of protein kinase B signaling	RCN3	IMP		Human	PMID:28939891
Biological Process	GO:0043129	surfactant homeostasis	Rcn3	IMP		Mouse	MGI:MGI:6201885|PMID:26252542

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern