About   Help   FAQ
Rcn3 Gene Detail
Summary
  • Symbol
    Rcn3
  • Name
    reticulocalbin 3, EF-hand calcium binding domain
  • Synonyms
    6030455P07Rik, D530026G20Rik, D7Ertd671e, RLP49
  • Feature Type
    protein coding gene
  • IDs
    MGI:1277122
    NCBI Gene: 52377
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:45082913-45092221 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 29.11 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    59 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1277122
protein coding gene Chr7:45082913-45092257 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032198
protein coding gene Chr7:45311904-45323946 (-)
A/J MGP_AJ_G0032177
protein coding gene Chr7:44455795-44465088 (-)
AKR/J MGP_AKRJ_G0032113
protein coding gene Chr7:45682246-45691539 (-)
BALB/cJ MGP_BALBcJ_G0032189
protein coding gene Chr7:44453163-44462456 (-)
C3H/HeJ MGP_C3HHeJ_G0031905
protein coding gene Chr7:46180186-46189483 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032681
protein coding gene Chr7:47585774-47595156 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029695
protein coding gene Chr7:47018530-47027112 (-)
CAST/EiJ MGP_CASTEiJ_G0031233
protein coding gene Chr7:37560300-37569610 (-)
CBA/J MGP_CBAJ_G0031869
protein coding gene Chr7:49141151-49150448 (-)
DBA/2J MGP_DBA2J_G0032027
protein coding gene Chr7:44124274-44133571 (-)
FVB/NJ MGP_FVBNJ_G0031978
protein coding gene Chr7:43901489-43910785 (-)
LP/J MGP_LPJ_G0032105
protein coding gene Chr7:45992052-46001062 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032015
protein coding gene Chr7:47857903-47867925 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032697
protein coding gene Chr7:44899370-44908680 (-)
PWK/PhJ MGP_PWKPhJ_G0030956
protein coding gene Chr7:37488833-37498320 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030793
protein coding gene Chr7:32906894-32919010 (-)
WSB/EiJ MGP_WSBEiJ_G0031350
protein coding gene Chr7:45385885-45396355 (-)



Homology
more
  • Human Ortholog
    RCN3, reticulocalbin 3
  • Vertebrate Orthologs
    8
  • Human Ortholog
    RCN3, reticulocalbin 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    RLP49
  • Links
    NCBI Gene ID: 57333
    neXtProt AC: NX_Q96D15
    UniProt: Q96D15

  • Chr Location
    19q13.33; chr19:49527579-49543638 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000019539 Ensembl Gene Model | MGI Sequence Detail 9309 C57BL/6J ±  kb
transcript ENSMUST00000211352 Ensembl | MGI Sequence Detail 1453 Not Applicable  
polypeptide ENSMUSP00000148227 Ensembl | MGI Sequence Detail 328 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 85
    cDNA 84
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1915346, MGI:1925837
References
more
  • Summaries
    All 37
    Developmental Gene Expression 3
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265611 Jin J, et al., Neonatal Respiratory Failure with Retarded Perinatal Lung Maturation in Mice Caused by Reticulocalbin 3 Disruption. Am J Respir Cell Mol Biol. 2016 Mar;54(3):410-23

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory