Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBM7
  • Mouse genes Rbm7
  • Rat genes Rbm7
  • Zfish genes rbm7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbm7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0071889	14-3-3 protein binding	RBM7	IDA		Human	PMID:25189701
Molecular Function	GO:0071889	14-3-3 protein binding	RBM7	IPI	UniProtKB:P62258|UniProtKB:P63104	Human	PMID:25189701
Molecular Function	GO:0097157	pre-mRNA intronic binding	RBM7	IDA		Human	PMID:25578728
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q6NZY4	Human	PMID:16263084
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q13435	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q6NZY4	Human	PMID:25578728
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q6NZY4	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:P42285	Human	PMID:27871484
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q6NZY4	Human	PMID:27871484
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q13435	Human	PMID:27905398
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q6NZY4	Human	PMID:27905398
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q13435	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q6NZY4	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:O94992,UniProtKB:P50750,UniProtKB:Q4G0J3	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:P24928,UniProtKB:P42285	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:P24928,UniProtKB:P50750	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:P50750	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q4G0J3|UniProtKB:Q7L2J0	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q7L2J0	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:A6NC98	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM7	IPI	UniProtKB:Q96CN4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rbm7	IPI	UniProtKB:Q6NZY4	Mouse	MGI:MGI:6368081|PMID:25525152
Molecular Function	GO:0003723	RNA binding	RBM7	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RBM7	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	RBM7	IMP		Human	PMID:25189701
Molecular Function	GO:0003723	RNA binding	RBM7	IDA		Human	PMID:25578728
Molecular Function	GO:0003723	RNA binding	RBM7	IDA		Human	PMID:30824372
Molecular Function	GO:0017069	snRNA binding	RBM7	IDA		Human	PMID:25852104
Cellular Component	GO:0005654	nucleoplasm	RBM7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	RBM7	IDA		Human	PMID:16263084
Cellular Component	GO:0005634	nucleus	RBM7	IDA		Human	PMID:21855801
Cellular Component	GO:0005634	nucleus	Rbm7	IDA		Mouse	MGI:MGI:6368081|PMID:25525152
Biological Process	GO:0007409	axonogenesis	rbm7	IMP	ZFIN:ZDB-MRPHLNO-170127-5	Zfish	PMID:27193168
Biological Process	GO:0021693	cerebellar Purkinje cell layer structural organization	rbm7	IMP	ZFIN:ZDB-MRPHLNO-170127-5	Zfish	PMID:27193168
Biological Process	GO:0016076	snRNA catabolic process	RBM7	IMP		Human	PMID:25852104

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern