About   Help   FAQ
Rbm7 Gene Detail
Summary
  • Symbol
    Rbm7
  • Name
    RNA binding motif protein 7
  • Synonyms
    1200007M24Rik, 1500011D06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914260
    NCBI Gene: 67010
  • Gene Overview
    MyGene.info: RBM7
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:48488701-48495299 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 26.43 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    76 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914260
protein coding gene Chr9:48488697-48495330 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034761
protein coding gene Chr9:47265078-47271696 (-)
A/J MGP_AJ_G0034742
protein coding gene Chr9:45866551-45873161 (-)
AKR/J MGP_AKRJ_G0034670
protein coding gene Chr9:46821472-46828090 (-)
BALB/cJ MGP_BALBcJ_G0034734
protein coding gene Chr9:45590344-45596956 (-)
C3H/HeJ MGP_C3HHeJ_G0034444
protein coding gene Chr9:47276511-47283158 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035254
protein coding gene Chr9:48615668-48622447 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032167
protein coding gene Chr9:45346005-45352486 (-)
CAST/EiJ MGP_CASTEiJ_G0033766
protein coding gene Chr9:47194950-47201564 (-)
CBA/J MGP_CBAJ_G0034416
protein coding gene Chr9:50326740-50333358 (-)
DBA/2J MGP_DBA2J_G0034575
protein coding gene Chr9:45719605-45726212 (-)
FVB/NJ MGP_FVBNJ_G0034516
protein coding gene Chr9:44974657-44981267 (-)
LP/J MGP_LPJ_G0034656
protein coding gene Chr9:47623881-47630499 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034560
protein coding gene Chr9:52045352-52051963 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035275
protein coding gene Chr9:46746111-46752729 (-)
PWK/PhJ MGP_PWKPhJ_G0033471
protein coding gene Chr9:45680359-45687159 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033306
protein coding gene Chr9:47060807-47067664 (-)
WSB/EiJ MGP_WSBEiJ_G0033879
protein coding gene Chr9:46794821-46801439 (-)



Homology
more
  • Human Ortholog
    RBM7, RNA binding motif protein 7
  • Vertebrate Orthologs
    11
  • Human Ortholog
    RBM7, RNA binding motif protein 7
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 10179
    neXtProt AC: NX_Q9Y580
    UniProt: Q9Y580

  • Chr Location
    11q23.2; chr11:114400529-114410610 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9379
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;2 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: RBM7
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000042396 Ensembl Gene Model | MGI Sequence Detail 6599 C57BL/6J ±  kb
transcript ENSMUST00000170000 Ensembl | MGI Sequence Detail 1773 Not Applicable  
polypeptide ENSMUSP00000126374 Ensembl | MGI Sequence Detail 265 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
    IPR034500 RBM7, RNA recognition motif
    IPR035979 RNA-binding domain superfamily
    IPR000504 RNA recognition motif domain
Molecular
Reagents
less
  • All nucleic 85
    cDNA 85

    Microarray probesets 6
Other
Accession IDs
less
MGI:1915055, MGI:2143231, MGI:2143331
References
more
  • Summaries
    All 27
    Gene Ontology 5
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory