Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAB28
  • Mouse genes Rab28
  • Rat genes Rab28
  • Zfish genes rab28
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rab28

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019003	GDP binding	RAB28	IDA		Human	PMID:19026641
Molecular Function	GO:0019003	GDP binding	RAB28	IDA		Human	PMID:20937701
Molecular Function	GO:0005525	GTP binding	RAB28	IDA		Human	PMID:19026641
Molecular Function	GO:0005525	GTP binding	Rab28	IDA		Rat	PMID:8647132|RGD:633759
Molecular Function	GO:0005515	protein binding	RAB28	IPI	UniProtKB:Q4G176	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RAB28	IPI	UniProtKB:Q9H8W4	Human	PMID:32296183
Cellular Component	GO:0036064	ciliary basal body	Rab28	IDA		Rat	PMID:23746546|RGD:8554122
Cellular Component	GO:0035253	ciliary rootlet	Rab28	IDA		Rat	PMID:23746546|RGD:8554122
Biological Process	GO:0006909	phagocytosis	rab28	IMP	ZFIN:ZDB-GENO-230110-2	Zfish	PMID:35471581
Biological Process	GO:0006909	phagocytosis	rab28	IMP	ZFIN:ZDB-GENO-230110-1	Zfish	PMID:35471581
Biological Process	GO:0006909	phagocytosis	rab28	IMP	ZFIN:ZDB-GENO-210708-23	Zfish	PMID:35471581
Biological Process	GO:0006909	phagocytosis	rab28	IMP	ZFIN:ZDB-GENO-230110-3	Zfish	PMID:35471581
Biological Process	GO:1905162	regulation of phagosome maturation	rab28	IMP	ZFIN:ZDB-GENO-230110-1	Zfish	PMID:35471581
Biological Process	GO:1905162	regulation of phagosome maturation	rab28	IMP	ZFIN:ZDB-GENO-210708-23	Zfish	PMID:35471581
Biological Process	GO:1905162	regulation of phagosome maturation	rab28	IMP	ZFIN:ZDB-GENO-230110-2	Zfish	PMID:35471581
Biological Process	GO:1905162	regulation of phagosome maturation	rab28	IMP	ZFIN:ZDB-GENO-230110-3	Zfish	PMID:35471581
Biological Process	GO:1901998	toxin transport	Rab28	IMP		Mouse	PMID:23716698
Biological Process	GO:0006776	vitamin A metabolic process	rab28	IMP	ZFIN:ZDB-GENO-210708-23	Zfish	PMID:35471581

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern