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Rab28
Gene Detail
 Symbol
Name
ID
Rab28
RAB28, member RAS oncogene family
MGI:1917285
Synonyms 2700023P08Rik, MGC:8039
Feature Type protein coding gene
Genetic Map
Chromosome 5
22.58 cM, cytoband B2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr5:41624976-41708155 bp, - strand
From NCBI annotation of GRCm38

  83180 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3135  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab28

Human
homologs
Human Homolog RAB28, RAB28, member RAS oncogene family
NCBI Gene ID 9364
neXtProt AC  NX_P51157
Human Synonyms  CORD18
Human Chr (Location)  4p15.33; chr4:13342239-13484365 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human RAB28
Alleles
and
phenotypes
All alleles(5) : Targeted(2) Gene trapped(3)
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process small GTPase mediated signal transduction
Component cell projection, ciliary basal body, ...
Function GDP binding, GTP binding, ...
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (47)    Tissues (9)    Images (18)
Theiler Stages: 23
Assay TypeResults
RNA in situ 47
cDNA source data(72)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(72) cDNA(72)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000029128 (Evidence)
Entrez Gene100972 (Evidence)
UniGene41555
DFCITC1575428, TC1593428
DoTSDT.110691239, DT.491618
NIA Mouse Gene IndexU026146
Consensus CDS ProjectCCDS19258.1
International Mouse Knockout Project StatusRab28
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 100972 NCBI Gene Model | MGI Sequence Detail 83180 C57BL/6J ±  kb
transcript NM_027295 RefSeq | MGI Sequence Detail 1636 C57BL/6 
polypeptide Q99KL7 UniProt | EBI | MGI Sequence Detail 221 Not Applicable 

For the selected sequences
All sequences(35) RefSeq(8) UniProt(4)
Polymorphisms SNPs within 2kb(363 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013602 ras-related protein Rab-28
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:185949 Licatalosi DD, et al., Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain. Genes Dev. 2012 Jul 15;26(14):1626-42
All references(40)
Other
accession IDs
MGI:2141204

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory