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Rab28
Gene Detail
Symbol

Name
ID
Rab28
RAB28, member RAS oncogene family
MGI:1917285
Synonyms
2700023P08Rik, MGC:8039
Feature Type
protein coding gene
Genetic Map
Chromosome 5
22.58 cM, cytoband B2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr5:41624976-41708155 bp, - strand
From Ensembl annotation of GRCm38

  83180 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3135  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RAB28
Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab28

Human
homologs
RAB28, RAB28, member RAS oncogene family
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 9364
neXtProt AC: NX_P51157

Human Synonyms: CORD18

Human Chr (Location): 4p15.33; chr4:13296017-13484365 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human RAB28

Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Chemically induced (ENU)(1) Gene trapped(3) Radiation induced(2) Targeted(2)
Genomic Mutations involving Rab28 (3)
Incidental mutations (data from Mutagenetix , APF )
Mutations Annotated to Human Diseases (2)    Phenotype Images(4)
Interactions
Rab28 interacts with 140 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process small GTPase mediated signal transduction, toxin transport
Component cell projection, ciliary basal body, ...
Function GDP binding, GTP binding, ...
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (47)    Tissues (9)    Images (18)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 47
cDNA source data(72)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rab28 ; ZFIN rab28    NEW 
Molecular
reagents
All nucleic(72) cDNA(72)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000029128 (Evidence)
Entrez Gene 100972 (Evidence)
UniGene 41555
DFCI TC1593428, TC1575428
DoTS DT.491618, DT.110691239
NIA Mouse Gene Index U026146
Consensus CDS Project CCDS19258.1
International Mouse Phenotyping Consortium Status Rab28
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029128 Ensembl Gene Model | MGI Sequence Detail 83180 C57BL/6J ±  kb
transcript ENSMUST00000031011 Ensembl | MGI Sequence Detail 1636 Not Applicable 
polypeptide ENSMUSP00000031011 Ensembl | MGI Sequence Detail 221 Not Applicable 

For the selected sequences
All sequences(42) RefSeq(11) UniProt(4)
Polymorphisms
SNPs within 2kb(363 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013602 ras-related protein Rab-28
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:197389 Slater LH, et al., CCT chaperonin complex is required for efficient delivery of anthrax toxin into the cytosol of host cells. Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):9932-7
All references(39)
Other
accession IDs
MGI:2141204

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory