Comparative GO Graph (mouse, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes
  • Mouse genes Pzp
  • Rat genes Pzp
  • Zfish genes a2ml,sb:cb37,si:ch211-212c13.10,si:dkey-105h12.2,si:dkey-46g23.2,si:dkey-46g23.5,zgc:165453,zgc:165518,zgc:171445,zgc:171446
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pzp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0048403	brain-derived neurotrophic factor binding	Pzp	IDA		Rat	PMID:11813239|RGD:10046023
Molecular Function	GO:0004866	endopeptidase inhibitor activity	Pzp	IDA		Mouse	PMID:5559967
Molecular Function	GO:0048406	nerve growth factor binding	Pzp	IDA		Rat	PMID:11813239|RGD:10046023
Molecular Function	GO:0044877	protein-containing complex binding	Pzp	IPI	RGD:2448|RGD:2447|RGD:621509	Rat	PMID:2470410|RGD:2315535
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Pzp	HDA		Mouse	MGI:MGI:6201853|PMID:28071719
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Pzp	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Biological Process	GO:0007566	embryo implantation	Pzp	IGI	MGI:MGI:99837	Mouse	PMID:14580373
Biological Process	GO:0001889	liver development	a2ml	IMP	ZFIN:ZDB-MRPHLNO-090212-1	Zfish	PMID:19011686
Biological Process	GO:0001889	liver development	a2ml	IMP	ZFIN:ZDB-MRPHLNO-090212-2	Zfish	PMID:19011686

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern