Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PTPN21
  • Mouse genes Ptpn21
  • Rat genes Ptpn21
  • Zfish genes ptpn21
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ptpn21

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:O08715-5	Human	PMID:15143158
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:P12931	Human	PMID:15143158
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:O14972	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:O95817	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:P47897	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:P51813	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q14142	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q4G0R1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q6X4W1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q6ZNH5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q70IA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q7L5A3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q8NEC5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q8TF42	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q96A72	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q96EF6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q96RF0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q9HC98-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q9HCG8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q9NPB6-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q9P286	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PTPN21	IPI	UniProtKB:Q9Y272	Human	PMID:32296183
Molecular Function	GO:0004725	protein tyrosine phosphatase activity	Ptpn21	IDA		Rat	PMID:7805871|RGD:633837
Biological Process	GO:0001837	epithelial to mesenchymal transition	ptpn21	IDA		Zfish	PMID:17893246
Biological Process	GO:0003007	heart morphogenesis	ptpn21	IMP	ZFIN:ZDB-MRPHLNO-080102-2	Zfish	PMID:17893246
Biological Process	GO:0003007	heart morphogenesis	ptpn21	IMP	ZFIN:ZDB-MRPHLNO-080102-3	Zfish	PMID:17893246
Biological Process	GO:0003007	heart morphogenesis	ptpn21	IMP	ZFIN:ZDB-MRPHLNO-080102-4	Zfish	PMID:17893246
Biological Process	GO:0001756	somitogenesis	ptpn21	IMP	ZFIN:ZDB-MRPHLNO-080102-2	Zfish	PMID:17893246
Biological Process	GO:0001756	somitogenesis	ptpn21	IMP	ZFIN:ZDB-MRPHLNO-080102-3	Zfish	PMID:17893246
Biological Process	GO:0001756	somitogenesis	ptpn21	IMP	ZFIN:ZDB-MRPHLNO-080102-4	Zfish	PMID:17893246

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern