Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PHYH
  • Mouse genes Phyh
  • Rat genes Phyh
  • Zfish genes phyh
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Phyh

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0031406	carboxylic acid binding	PHYH	IDA		Human	PMID:16186124
Molecular Function	GO:0003824	catalytic activity	Phyh	IDA		Mouse	PMID:9326939
Molecular Function	GO:0008198	ferrous iron binding	PHYH	IDA		Human	PMID:10744784
Molecular Function	GO:0008198	ferrous iron binding	PHYH	IDA		Human	PMID:11555634
Molecular Function	GO:0008198	ferrous iron binding	PHYH	IDA		Human	PMID:16186124
Molecular Function	GO:0008198	ferrous iron binding	PHYH	IDA		Human	PMID:9326939
Molecular Function	GO:0031418	L-ascorbic acid binding	PHYH	IDA		Human	PMID:10744784
Molecular Function	GO:0048244	phytanoyl-CoA dioxygenase activity	PHYH	IDA		Human	PMID:10744784
Molecular Function	GO:0048244	phytanoyl-CoA dioxygenase activity	PHYH	IDA		Human	PMID:11555634
Molecular Function	GO:0048244	phytanoyl-CoA dioxygenase activity	PHYH	IDA		Human	PMID:16186124
Molecular Function	GO:0048244	phytanoyl-CoA dioxygenase activity	PHYH	IDA		Human	PMID:9326939
Molecular Function	GO:0048244	phytanoyl-CoA dioxygenase activity	Phyh	IDA		Rat	PMID:10588950|RGD:727286
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:P27124	Human	PMID:10051602
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:P43364	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q8IZU0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q8IZU0	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q8IZU0	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:A5PKX9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:P43364	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:O00463	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:O75925	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:P29323-3	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q3B7T1	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q6GQQ9-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q6PCB6	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q86UV6-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q8IUI8	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q8N865	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q96FT7-4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q9UDY8-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q9UJX2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q9ULX5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q9UNS2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q9UPM6	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:Q9Y2M5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHYH	IPI	UniProtKB:P39108	Human	PMID:9326939
Molecular Function	GO:0005515	protein binding	Phyh	IPI	PR:Q91WC3	Mouse	PMID:12767919
Molecular Function	GO:0005515	protein binding	Phyh	IPI	PR:Q8K0S0	Mouse	PMID:10686344
Cellular Component	GO:0097731	9+0 non-motile cilium	PHYH	IDA		Human	PMID:29257953
Cellular Component	GO:0005739	mitochondrion	Phyh	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Phyh	IDA		Rat	PMID:3620488|RGD:13831314
Cellular Component	GO:0005777	peroxisome	PHYH	IDA		Human	PMID:9326939
Cellular Component	GO:0005777	peroxisome	Phyh	IDA		Rat	PMID:10588950|RGD:727286
Cellular Component	GO:0005777	peroxisome	Phyh	IDA		Rat	PMID:14561759|RGD:1580664
Biological Process	GO:0019606	2-oxobutyrate catabolic process	Phyh	IDA		Rat	PMID:10588950|RGD:727286
Biological Process	GO:0006103	2-oxoglutarate metabolic process	PHYH	IDA		Human	PMID:16186124
Biological Process	GO:0001561	fatty acid alpha-oxidation	PHYH	IDA		Human	PMID:16186124
Biological Process	GO:0001561	fatty acid alpha-oxidation	PHYH	IDA		Human	PMID:9326939
Biological Process	GO:0001561	fatty acid alpha-oxidation	Phyh	IDA		Mouse	PMID:12915479
Biological Process	GO:0001561	fatty acid alpha-oxidation	Phyh	IDA		Mouse	PMID:9326939
Biological Process	GO:0001561	fatty acid alpha-oxidation	Phyh	IDA		Rat	PMID:10588950|RGD:727286
Biological Process	GO:0006720	isoprenoid metabolic process	PHYH	IDA		Human	PMID:11555634
Biological Process	GO:0097089	methyl-branched fatty acid metabolic process	PHYH	IDA		Human	PMID:10744784

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern