Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PHF19
  • Mouse genes Phf19
  • Rat genes Phf19
  • Zfish genes phf19
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Phf19

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035064	methylated histone binding	PHF19	IDA		Human	PMID:23104054
Molecular Function	GO:0035064	methylated histone binding	PHF19	IDA		Human	PMID:23160351
Molecular Function	GO:0035064	methylated histone binding	PHF19	IDA		Human	PMID:23273982
Molecular Function	GO:0035064	methylated histone binding	Phf19	IDA		Mouse	MGI:MGI:5487476|PMID:23104054
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q15022	Human	PMID:23104054
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q9H6W3	Human	PMID:23160351
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:O43463	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:O60341	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q9H5I1	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:A0JP26	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:O95429	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:P09067	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:P68400	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q8NBZ0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q8TAD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q92997	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q96EG3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q96MU7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q9BRK4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q9BT49	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q9H2G4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q9NVV9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q9P2K3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q9UGI0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:D3DTS7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:P14136	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:P19404	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:P29692-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q00403	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q01658	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q8WUW1	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PHF19	IPI	UniProtKB:Q9UBB4	Human	PMID:32814053
Cellular Component	GO:0035098	ESC/E(Z) complex	Phf19	IDA		Mouse	MGI:MGI:5487475|PMID:23160351
Cellular Component	GO:0035098	ESC/E(Z) complex	Phf19	IDA		Mouse	MGI:MGI:5318799|PMID:22438827
Biological Process	GO:0040029	epigenetic regulation of gene expression	Phf19	IMP		Mouse	MGI:MGI:5318799|PMID:22438827
Biological Process	GO:0045814	negative regulation of gene expression, epigenetic	PHF19	IMP		Human	PMID:23104054
Biological Process	GO:0045814	negative regulation of gene expression, epigenetic	Phf19	IMP		Mouse	MGI:MGI:5487476|PMID:23104054
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Phf19	IMP		Mouse	MGI:MGI:5487476|PMID:23104054
Biological Process	GO:0048863	stem cell differentiation	Phf19	IMP		Mouse	MGI:MGI:5487476|PMID:23104054
Biological Process	GO:0048863	stem cell differentiation	Phf19	IMP		Mouse	MGI:MGI:5487475|PMID:23160351
Biological Process	GO:0019827	stem cell population maintenance	Phf19	IMP		Mouse	MGI:MGI:5318799|PMID:22438827

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern