Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PCDH8
  • Mouse genes Pcdh8
  • Rat genes Pcdh8
  • Zfish genes si:ch211-199f5.1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcdh8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0098978	glutamatergic synapse	Pcdh8	IDA		Rat	PMID:17988630|RGD:13702360
Cellular Component	GO:0098978	glutamatergic synapse	Pcdh8	IMP		Rat	PMID:17988630|RGD:13702360
Cellular Component	GO:0045211	postsynaptic membrane	Pcdh8	IDA		Rat	PMID:17988630|RGD:13702360
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Pcdh8	EXP		Rat	PMID:10383464|RGD:68758
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Pcdh8	IDA		Rat	PMID:10383464|RGD:68758
Cellular Component	GO:0045202	synapse	Pcdh8	IDA		Rat	PMID:10383464|RGD:68758
Biological Process	GO:0007268	chemical synaptic transmission	Pcdh8	IDA		Rat	PMID:10383464|RGD:68758
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Pcdh8	EXP		Rat	PMID:10383464|RGD:68758
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Pcdh8	IDA		Rat	PMID:10383464|RGD:68758
Biological Process	GO:0016331	morphogenesis of embryonic epithelium	Pcdh8	IMP		Mouse	PMID:12591245
Biological Process	GO:0099179	regulation of synaptic membrane adhesion	Pcdh8	IDA		Rat	PMID:17988630|RGD:13702360
Biological Process	GO:0099179	regulation of synaptic membrane adhesion	Pcdh8	IMP		Rat	PMID:17988630|RGD:13702360
Biological Process	GO:0001756	somitogenesis	Pcdh8	IMP		Mouse	PMID:12591245

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern