Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PCBP1
  • Mouse genes Pcbp1
  • Rat genes
  • Zfish genes pcbp2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	PCBP1	HDA		Human	PMID:25468996
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Pcbp1	IDA		Mouse	PMID:15836633
Molecular Function	GO:0003730	mRNA 3'-UTR binding	pcbp2	IDA		Zfish	PMID:31227602
Molecular Function	GO:0003729	mRNA binding	PCBP1	IDA		Human	PMID:14722620
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:P26599	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q15366	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q96PU8	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q9UHX1	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q9Y2W2	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q9Y3Q8	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q13153	Human	PMID:17389360
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q13153-1	Human	PMID:17389360
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q14498	Human	PMID:17389360
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q14498-2	Human	PMID:17389360
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:O52302	Human	PMID:20374249
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q67020	Human	PMID:21994455
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:O41951	Human	PMID:22028648
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q13427	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q6P2Q9	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q96NB3	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q96EK4	Human	PMID:22673507
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:P09012	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q96C12	Human	PMID:28169274
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:P09012	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:A0A024R5S0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:O00425	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:O43251-10	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:P09012	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:P98179	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q08117-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q13351	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBP1	IPI	UniProtKB:Q6ZRY4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Pcbp1	IPI	UniProtKB:Q99N13	Mouse	MGI:MGI:3688344|PMID:15102471
Molecular Function	GO:0003723	RNA binding	PCBP1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	PCBP1	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	PCBP1	IDA		Human	PMID:7556077
Molecular Function	GO:0003723	RNA binding	PCBP1	IDA		Human	PMID:7607214
Molecular Function	GO:0003723	RNA binding	PCBP1	IDA		Human	PMID:8152927
Molecular Function	GO:0098847	sequence-specific single stranded DNA binding	Pcbp1	IDA		Mouse	PMID:15836633
Molecular Function	GO:0003697	single-stranded DNA binding	PCBP1	IDA		Human	PMID:8152927
Molecular Function	GO:0003697	single-stranded DNA binding	Pcbp1	IDA		Mouse	PMID:15836633
Cellular Component	GO:0005737	cytoplasm	PCBP1	IDA		Human	PMID:25468996
Cellular Component	GO:0005737	cytoplasm	Pcbp1	IDA		Mouse	PMID:16979592
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	PCBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	PCBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070062	extracellular exosome	PCBP1	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	PCBP1	HDA		Human	PMID:20458337
Cellular Component	GO:0070062	extracellular exosome	PCBP1	HDA		Human	PMID:23533145
Cellular Component	GO:0016020	membrane	PCBP1	HDA		Human	PMID:19946888
Cellular Component	GO:0016607	nuclear speck	PCBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	PCBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Pcbp1	IDA		Mouse	PMID:16979592
Cellular Component	GO:0005634	nucleus	Pcbp1	IDA		Mouse	PMID:15836633
Cellular Component	GO:0014069	postsynaptic density	Pcbp1	EXP		Mouse	PMID:14532281
Cellular Component	GO:0014069	postsynaptic density	Pcbp1	IDA		Mouse	PMID:14532281
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Pcbp1	IDA		Mouse	PMID:15836633
Biological Process	GO:0039694	viral RNA genome replication	PCBP1	IDA		Human	PMID:12414943

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern