Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PCBD1
  • Mouse genes Pcbd1
  • Rat genes Pcbd1
  • Zfish genes pcbd1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcbd1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	Pcbd1	IDA		Rat	PMID:1465414|RGD:12792994
Molecular Function	GO:0042802	identical protein binding	PCBD1	IPI	UniProtKB:P61457	Human	PMID:16189514
Molecular Function	GO:0042802	identical protein binding	PCBD1	IPI	UniProtKB:P61457	Human	PMID:20211142
Molecular Function	GO:0042802	identical protein binding	PCBD1	IPI	UniProtKB:P61457	Human	PMID:21516116
Molecular Function	GO:0042802	identical protein binding	PCBD1	IPI	UniProtKB:P61457	Human	PMID:25416956
Molecular Function	GO:0042802	identical protein binding	PCBD1	IPI	UniProtKB:P61457	Human	PMID:32296183
Molecular Function	GO:0042802	identical protein binding	Pcbd1	IPI	PR:P61458	Mouse	PMID:15182178
Molecular Function	GO:0004505	phenylalanine 4-monooxygenase activity	Pcbd1	IDA		Mouse	PMID:15182178
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P51116	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q8TBB1	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q96HA8	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q9H8Y8	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P05067	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q9UKV3	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P35680	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P51116	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P20823	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P51116	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q07654	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q8TBB1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:A0A0S2Z5X4	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q9H8Y8	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P51116	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q9H8Y8	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P25786	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P35680	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q07654	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q63ZY3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P20823	Human	PMID:35140242
Molecular Function	GO:0005515	protein binding	PCBD1	IPI	UniProtKB:P35680	Human	PMID:35140242
Molecular Function	GO:0005515	protein binding	Pcbd1	IPI	PR:Q9CZL5	Mouse	PMID:15182178
Molecular Function	GO:0005515	protein binding	Pcbd1	IPI	PR:P22361	Mouse	PMID:15182178
Molecular Function	GO:0003713	transcription coactivator activity	Pcbd1	IDA		Rat	PMID:1763325|RGD:69920
Cellular Component	GO:0005829	cytosol	PCBD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070062	extracellular exosome	PCBD1	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	PCBD1	HDA		Human	PMID:23533145
Cellular Component	GO:0005654	nucleoplasm	PCBD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Pcbd1	IPI	PR:P22361	Mouse	PMID:15182178
Biological Process	GO:0006558	L-phenylalanine metabolic process	Pcbd1	IDA		Rat	PMID:1465414|RGD:12792994
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Pcbd1	IDA		Rat	PMID:1763325|RGD:69920
Biological Process	GO:0043393	regulation of protein binding	Pcbd1	IDA		Rat	PMID:1763325|RGD:69920

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern