Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OS9
  • Mouse genes Os9
  • Rat genes Os9
  • Zfish genes os9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Os9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0002020	protease binding	Os9	IPI	RGD:10893	Rat	PMID:12093806|RGD:1359780
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q16665	Human	PMID:15721254
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q9GZT9	Human	PMID:15721254
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q9H6Z9	Human	PMID:15721254
Molecular Function	GO:0005515	protein binding	OS9	IDA		Human	PMID:18264092
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:P14625	Human	PMID:18264092
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q86TM6	Human	PMID:18264092
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q9UBV2	Human	PMID:18264092
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:P11021	Human	PMID:18502753
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q96DZ1	Human	PMID:18502753
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q96DZ1-1	Human	PMID:18502753
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q9UBV2	Human	PMID:18711132
Molecular Function	GO:0005515	protein binding	OS9	IDA		Human	PMID:19346256
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:O43889-2	Human	PMID:20546900
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q9H295	Human	PMID:20546900
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q9UBV2	Human	PMID:22119785
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:O75460-1	Human	PMID:26551274
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q9UBV2	Human	PMID:26551274
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q9H6Z9	Human	PMID:26972000
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q86TM6	Human	PMID:28827405
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q9UBV2	Human	PMID:28827405
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:Q9UBV2	Human	PMID:29496332
Molecular Function	GO:0005515	protein binding	OS9	IPI	UniProtKB:P00533	Human	PMID:35384245
Molecular Function	GO:0005515	protein binding	Os9	IPI	UniProtKB:Q9Z140	Mouse	MGI:MGI:5688850|PMID:10403379
Cellular Component	GO:0005783	endoplasmic reticulum	OS9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	Os9	IDA		Rat	PMID:12093806|RGD:1359780
Cellular Component	GO:0005788	endoplasmic reticulum lumen	OS9	IDA		Human	PMID:18264092
Cellular Component	GO:0005788	endoplasmic reticulum lumen	OS9	IDA		Human	PMID:18417469
Cellular Component	GO:0005788	endoplasmic reticulum lumen	OS9	IDA		Human	PMID:19084021
Cellular Component	GO:0005788	endoplasmic reticulum lumen	Os9	IDA		Rat	PMID:19084021|RGD:8554273
Biological Process	GO:1904153	negative regulation of retrograde protein transport, ER to cytosol	OS9	IMP		Human	PMID:25660456
Biological Process	GO:0006621	protein retention in ER lumen	OS9	IDA		Human	PMID:18417469
Biological Process	GO:0006605	protein targeting	Os9	IDA		Rat	PMID:12093806|RGD:1359780
Biological Process	GO:0016567	protein ubiquitination	OS9	IMP		Human	PMID:19084021
Biological Process	GO:0034976	response to endoplasmic reticulum stress	OS9	IDA		Human	PMID:19084021
Biological Process	GO:0030433	ubiquitin-dependent ERAD pathway	OS9	IMP		Human	PMID:18264092
Biological Process	GO:0030433	ubiquitin-dependent ERAD pathway	OS9	IMP		Human	PMID:18417469
Biological Process	GO:0030433	ubiquitin-dependent ERAD pathway	OS9	IMP		Human	PMID:19346256
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	OS9	IMP		Human	PMID:19084021

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern