Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OGA
  • Mouse genes Oga
  • Rat genes Oga
  • Zfish genes oga
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Oga

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016231	beta-N-acetylglucosaminidase activity	OGA	IDA		Human	PMID:11148210
Molecular Function	GO:0016231	beta-N-acetylglucosaminidase activity	Oga	IDA		Rat	PMID:19004814|RGD:8693604
Molecular Function	GO:0004402	histone acetyltransferase activity	Oga	IMP		Rat	PMID:15485860|RGD:2305962
Molecular Function	GO:0042802	identical protein binding	OGA	IPI	UniProtKB:O60502	Human	PMID:28319083
Molecular Function	GO:0042802	identical protein binding	OGA	IPI	UniProtKB:O60502	Human	PMID:28346407
Molecular Function	GO:0005515	protein binding	Oga	IPI	UniProtKB:P62806	Mouse	MGI:MGI:3624164|PMID:16356930
Cellular Component	GO:0005829	cytosol	OGA	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	OGA	IDA		Human	PMID:11148210
Cellular Component	GO:0016020	membrane	OGA	HDA		Human	PMID:19946888
Cellular Component	GO:0005739	mitochondrion	Oga	IDA		Rat	PMID:19004814|RGD:8693604
Biological Process	GO:0007568	aging	Oga	IEP		Rat	PMID:18185980|RGD:2305952
Biological Process	GO:0046060	dATP metabolic process	Oga	IMP		Rat	PMID:17573462|RGD:2305953
Biological Process	GO:0006044	N-acetylglucosamine metabolic process	OGA	IDA		Human	PMID:11148210
Biological Process	GO:0006044	N-acetylglucosamine metabolic process	Oga	IMP		Rat	PMID:19139380|RGD:2305938
Biological Process	GO:0070265	necrotic cell death	Oga	IMP		Rat	PMID:16899550|RGD:2305957
Biological Process	GO:0010616	negative regulation of cardiac muscle adaptation	Oga	IMP		Rat	PMID:17573462|RGD:2305953
Biological Process	GO:0060051	negative regulation of protein glycosylation	Oga	IMP		Rat	PMID:16332679|RGD:2305959
Biological Process	GO:0051928	positive regulation of calcium ion transport	Oga	IMP		Rat	PMID:19139380|RGD:2305938
Biological Process	GO:0010524	positive regulation of calcium ion transport into cytosol	Oga	IMP		Rat	PMID:16107505|RGD:2305960
Biological Process	GO:0031343	positive regulation of cell killing	Oga	IMP		Rat	PMID:19139380|RGD:2305938
Biological Process	GO:0051054	positive regulation of DNA metabolic process	Oga	IMP		Rat	PMID:19139380|RGD:2305938
Biological Process	GO:0046326	positive regulation of glucose import	Oga	IMP		Rat	PMID:16000877|RGD:2305961
Biological Process	GO:0060124	positive regulation of growth hormone secretion	Oga	IMP		Rat	PMID:12242036|RGD:1299304
Biological Process	GO:0032024	positive regulation of insulin secretion	Oga	IMP		Rat	PMID:17095531|RGD:2305956
Biological Process	GO:0051901	positive regulation of mitochondrial depolarization	Oga	IMP		Rat	PMID:19139380|RGD:2305938
Biological Process	GO:0043243	positive regulation of protein-containing complex disassembly	Oga	IMP		Rat	PMID:17573462|RGD:2305953
Biological Process	GO:0045862	positive regulation of proteolysis	Oga	IMP		Rat	PMID:17573462|RGD:2305953
Biological Process	GO:0006517	protein deglycosylation	OGA	IDA		Human	PMID:11148210
Biological Process	GO:0006612	protein targeting to membrane	Oga	IMP		Rat	PMID:16000877|RGD:2305961
Biological Process	GO:0048545	response to steroid hormone	Oga	IEP		Rat	PMID:19139380|RGD:2305938

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern