Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ODAM
  • Mouse genes Odam
  • Rat genes Odam
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Odam

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ODAM	IPI	UniProtKB:Q12774	Human	PMID:25911094
Molecular Function	GO:0005515	protein binding	ODAM	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ODAM	IPI	UniProtKB:O14964	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ODAM	IPI	UniProtKB:O95231	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ODAM	IPI	UniProtKB:P09234	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ODAM	IPI	UniProtKB:Q03989	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ODAM	IPI	UniProtKB:Q13444-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ODAM	IPI	UniProtKB:Q71SY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ODAM	IPI	UniProtKB:Q7Z3K3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ODAM	IPI	UniProtKB:Q8IWB4	Human	PMID:32296183
Cellular Component	GO:0071944	cell periphery	ODAM	IDA		Human	PMID:25911094
Cellular Component	GO:0005737	cytoplasm	ODAM	IDA		Human	PMID:25911094
Cellular Component	GO:0005737	cytoplasm	Odam	IDA		Mouse	PMID:22387195
Cellular Component	GO:0005829	cytosol	ODAM	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005576	extracellular region	Odam	IDA		Mouse	PMID:15234340
Cellular Component	GO:0005615	extracellular space	ODAM	IDA		Human	PMID:25911094
Cellular Component	GO:0072686	mitotic spindle	ODAM	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	ODAM	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	ODAM	IDA		Human	PMID:25911094
Cellular Component	GO:0005634	nucleus	Odam	IDA		Mouse	PMID:22387195
Cellular Component	GO:0099512	supramolecular fiber	ODAM	IDA		Human	PMID:14647039
Biological Process	GO:0006954	inflammatory response	ODAM	IDA		Human	PMID:25911094
Biological Process	GO:0042476	odontogenesis	Odam	IEP		Rat	PMID:25911094|RGD:10400875
Biological Process	GO:0042475	odontogenesis of dentin-containing tooth	ODAM	IEP		Human	PMID:16674676
Biological Process	GO:0060054	positive regulation of epithelial cell proliferation involved in wound healing	ODAM	IEP		Human	PMID:25911094
Biological Process	GO:0010628	positive regulation of gene expression	ODAM	IMP		Human	PMID:25911094
Biological Process	GO:0043547	positive regulation of GTPase activity	ODAM	IMP		Human	PMID:25911094
Biological Process	GO:0001934	positive regulation of protein phosphorylation	ODAM	IMP		Human	PMID:25911094
Biological Process	GO:0032956	regulation of actin cytoskeleton organization	ODAM	IDA		Human	PMID:25911094
Biological Process	GO:0009611	response to wounding	Odam	IDA		Mouse	MGI:MGI:5688793|PMID:25911094

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern