Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NPTXR
  • Mouse genes Nptxr
  • Rat genes Nptxr
  • Zfish genes nptxra,nptxrb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nptxr

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008029	pentraxin receptor activity	Nptxr	IDA		Rat	PMID:9261167|RGD:633357
Molecular Function	GO:0019903	protein phosphatase binding	Nptxr	IPI	UniProtKB:E9Q612	Mouse	MGI:MGI:3577156|PMID:15673668
Molecular Function	GO:0044877	protein-containing complex binding	Nptxr	IDA		Rat	PMID:10748068|RGD:1642303
Cellular Component	GO:0005615	extracellular space	Nptxr	IDA		Rat	PMID:10748068|RGD:1642303
Cellular Component	GO:0098978	glutamatergic synapse	NPTXR	IDA		Human	PMID:27986928
Cellular Component	GO:0098978	glutamatergic synapse	NPTXR	IMP		Human	PMID:27986928
Cellular Component	GO:0098978	glutamatergic synapse	Nptxr	IDA		Mouse	PMID:27986928
Cellular Component	GO:0098978	glutamatergic synapse	Nptxr	IPI		Mouse	PMID:27986928
Cellular Component	GO:0098978	glutamatergic synapse	Nptxr	IMP		Mouse	PMID:27986928
Cellular Component	GO:0005886	plasma membrane	Nptxr	IDA		Mouse	MGI:MGI:3577156|PMID:15673668
Cellular Component	GO:0005886	plasma membrane	Nptxr	IDA		Rat	PMID:10748068|RGD:1642303
Biological Process	GO:0031175	neuron projection development	Nptxr	IMP		Mouse	MGI:MGI:3577156|PMID:15673668
Biological Process	GO:0099645	neurotransmitter receptor localization to postsynaptic specialization membrane	Nptxr	IDA		Mouse	PMID:27986928
Biological Process	GO:0099645	neurotransmitter receptor localization to postsynaptic specialization membrane	Nptxr	IMP		Mouse	PMID:27986928
Biological Process	GO:0099645	neurotransmitter receptor localization to postsynaptic specialization membrane	Nptxr	IPI		Mouse	PMID:27986928
Biological Process	GO:0098962	regulation of postsynaptic neurotransmitter receptor activity	NPTXR	IDA		Human	PMID:27986928
Biological Process	GO:0098962	regulation of postsynaptic neurotransmitter receptor activity	NPTXR	IMP		Human	PMID:27986928
Biological Process	GO:0099150	regulation of postsynaptic specialization assembly	Nptxr	IMP		Mouse	PMID:27986928
Biological Process	GO:0099150	regulation of postsynaptic specialization assembly	Nptxr	IDA		Mouse	PMID:27986928
Biological Process	GO:0099150	regulation of postsynaptic specialization assembly	Nptxr	IPI		Mouse	PMID:27986928
Biological Process	GO:0042542	response to hydrogen peroxide	Nptxr	IEP		Rat	PMID:17397968|RGD:1642300

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern