Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NEDD9
  • Mouse genes Nedd9
  • Rat genes Nedd9
  • Zfish genes nedd9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nedd9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q8TDZ2	Human	PMID:11827972
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:P84022,UniProtKB:Q96J02	Human	PMID:15051726
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q9H8V3	Human	PMID:16394104
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q9QZK2	Human	PMID:19103205
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q06124	Human	PMID:19275884
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:P14373	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q15742	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q8N9N5	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:P00519	Human	PMID:22810897
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:O14965,UniProtKB:Q14247	Human	PMID:24574519
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q14247	Human	PMID:24574519
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:O75815	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:P14373	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:P25963	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:P86479	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q04864	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q15654	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q15742	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q8HWS3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q8N9N5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q93062	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:O75815	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:Q07832	Human	PMID:29191835
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:P52952	Human	PMID:29899023
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:P84022	Human	PMID:29899023
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:O75381	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	NEDD9	IPI	UniProtKB:P06241	Human	PMID:9360983
Molecular Function	GO:0005515	protein binding	Nedd9	IPI	UniProtKB:Q9QZS8	Mouse	MGI:MGI:4840153|PMID:20956287
Molecular Function	GO:0005515	protein binding	Nedd9	IPI	UniProtKB:Q60598	Mouse	MGI:MGI:6867297|PMID:24574519
Molecular Function	GO:0005515	protein binding	Nedd9	IPI	UniProtKB:P34152	Mouse	MGI:MGI:6839030|PMID:25059660
Molecular Function	GO:1990782	protein tyrosine kinase binding	NEDD9	IPI	UniProtKB:Q05397	Human	PMID:18256281
Cellular Component	GO:0036064	ciliary basal body	NEDD9	IDA		Human	PMID:17604723
Cellular Component	GO:0005829	cytosol	NEDD9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005925	focal adhesion	NEDD9	IDA		Human	PMID:19103205
Cellular Component	GO:0005925	focal adhesion	NEDD9	IDA		Human	PMID:19275884
Cellular Component	GO:0001772	immunological synapse	Nedd9	IDA		Mouse	MGI:MGI:6838590|PMID:27359298
Cellular Component	GO:0072686	mitotic spindle	NEDD9	IDA		Human	PMID:16394104
Cellular Component	GO:0005654	nucleoplasm	NEDD9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	NEDD9	IDA		Human	PMID:29899023
Cellular Component	GO:0005634	nucleus	Nedd9	IDA		Mouse	PMID:19376971
Cellular Component	GO:0005886	plasma membrane	NEDD9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000922	spindle pole	Nedd9	IDA		Mouse	PMID:19376971
Biological Process	GO:0090630	activation of GTPase activity	Nedd9	IGI	MGI:MGI:104580	Mouse	PMID:25621495
Biological Process	GO:0090630	activation of GTPase activity	Nedd9	IGI	MGI:MGI:104686	Mouse	PMID:25621495
Biological Process	GO:0090630	activation of GTPase activity	Nedd9	IGI	MGI:MGI:88508	Mouse	PMID:25621495
Biological Process	GO:0061523	cilium disassembly	NEDD9	IMP		Human	PMID:17604723
Biological Process	GO:0007611	learning or memory	Nedd9	IMP		Mouse	MGI:MGI:5752429|PMID:26683084
Biological Process	GO:0097021	lymphocyte migration into lymphoid organs	Nedd9	IMP		Mouse	MGI:MGI:3694862|PMID:16148091
Biological Process	GO:0030336	negative regulation of cell migration	Nedd9	IMP		Mouse	MGI:MGI:6839030|PMID:25059660
Biological Process	GO:0030335	positive regulation of cell migration	NEDD9	IMP		Human	PMID:18256281
Biological Process	GO:1902952	positive regulation of dendritic spine maintenance	Nedd9	IMP		Mouse	MGI:MGI:5752429|PMID:26683084
Biological Process	GO:2000522	positive regulation of immunological synapse formation	Nedd9	IMP		Mouse	MGI:MGI:6838590|PMID:27359298
Biological Process	GO:0140131	positive regulation of lymphocyte chemotaxis	Nedd9	IMP		Mouse	MGI:MGI:3694862|PMID:16148091
Biological Process	GO:0045672	positive regulation of osteoclast differentiation	Nedd9	IMP		Mouse	MGI:MGI:6252929|PMID:27336669
Biological Process	GO:1903829	positive regulation of protein localization	Nedd9	IMP		Mouse	MGI:MGI:6838590|PMID:27359298
Biological Process	GO:0061098	positive regulation of protein tyrosine kinase activity	NEDD9	IDA		Human	PMID:18256281
Biological Process	GO:1900026	positive regulation of substrate adhesion-dependent cell spreading	NEDD9	IMP		Human	PMID:18256281
Biological Process	GO:0032956	regulation of actin cytoskeleton organization	Nedd9	IMP		Mouse	MGI:MGI:6838590|PMID:27359298

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern