Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NDNF
  • Mouse genes Ndnf
  • Rat genes Ndnf
  • Zfish genes ndnf
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ndnf

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005539	glycosaminoglycan binding	Ndnf	IDA		Mouse	PMID:18757743
Molecular Function	GO:0008201	heparin binding	Ndnf	IDA		Mouse	PMID:18757743
Cellular Component	GO:0031012	extracellular matrix	Ndnf	IDA		Mouse	PMID:18757743
Cellular Component	GO:0005576	extracellular region	NDNF	IDA		Human	PMID:20969804
Cellular Component	GO:0005615	extracellular space	NDNF	IDA		Human	PMID:35037619
Cellular Component	GO:0005615	extracellular space	NDNF	IDA		Human	PMID:31883645
Biological Process	GO:0001525	angiogenesis	NDNF	IDA		Human	PMID:24706764
Biological Process	GO:0044344	cellular response to fibroblast growth factor stimulus	NDNF	IMP		Human	PMID:31883645
Biological Process	GO:0071456	cellular response to hypoxia	NDNF	IDA		Human	PMID:24706764
Biological Process	GO:0048702	embryonic neurocranium morphogenesis	ndnf	IMP	ZFIN:ZDB-MRPHLNO-130807-3	Zfish	PMID:23559552
Biological Process	GO:0048702	embryonic neurocranium morphogenesis	ndnf	IMP	ZFIN:ZDB-MRPHLNO-130807-2	Zfish	PMID:23559552
Biological Process	GO:0030198	extracellular matrix organization	Ndnf	IDA		Mouse	PMID:18757743
Biological Process	GO:0021828	gonadotrophin-releasing hormone neuronal migration to the hypothalamus	Ndnf	IMP		Mouse	MGI:MGI:6442643|PMID:31883645
Biological Process	GO:0021828	gonadotrophin-releasing hormone neuronal migration to the hypothalamus	ndnf	IMP		Zfish	PMID:31883645|ZFIN:ZDB-PUB-191231-14
Biological Process	GO:2000352	negative regulation of endothelial cell apoptotic process	NDNF	IDA		Human	PMID:24706764
Biological Process	GO:0043524	negative regulation of neuron apoptotic process	NDNF	IDA		Human	PMID:20969804
Biological Process	GO:0001764	neuron migration	NDNF	IDA		Human	PMID:20969804
Biological Process	GO:0007263	nitric oxide mediated signal transduction	NDNF	IDA		Human	PMID:24706764
Biological Process	GO:0019800	peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan	Ndnf	IDA		Mouse	PMID:18757743
Biological Process	GO:0010811	positive regulation of cell-substrate adhesion	Ndnf	IDA		Mouse	PMID:18757743
Biological Process	GO:0010976	positive regulation of neuron projection development	NDNF	IDA		Human	PMID:20969804
Biological Process	GO:0002931	response to ischemia	Ndnf	IDA		Mouse	MGI:MGI:5607385|PMID:24706764
Biological Process	GO:0061042	vascular wound healing	Ndnf	IMP		Mouse	MGI:MGI:5607385|PMID:24706764

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern