Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MSI1
  • Mouse genes Msi1
  • Rat genes Msi1
  • Zfish genes msi1a,msi1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Msi1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	MSI1	IPI	UniProtKB:O43347	Human	PMID:30367664
Molecular Function	GO:0042802	identical protein binding	Msi1	IPI	UniProtKB:Q61474	Mouse	MGI:MGI:5770029|PMID:26197342
Molecular Function	GO:0008266	poly(U) RNA binding	Msi1	IDA		Mouse	PMID:11588182
Molecular Function	GO:0005515	protein binding	MSI1	IPI	UniProtKB:P10636-8	Human	PMID:30367664
Molecular Function	GO:0005515	protein binding	MSI1	IPI	UniProtKB:P52597	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSI1	IPI	UniProtKB:P55795	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	MSI1	HDA		Human	PMID:22681889
Molecular Function	GO:0003727	single-stranded RNA binding	Msi1	IDA		Mouse	PMID:11588182
Cellular Component	GO:0005737	cytoplasm	Msi1	IDA		Mouse	PMID:15076722
Cellular Component	GO:0005737	cytoplasm	Msi1	IDA		Mouse	PMID:11588182
Cellular Component	GO:0005634	nucleus	Msi1	IDA		Mouse	PMID:15076722
Cellular Component	GO:0005844	polysome	Msi1	IDA		Mouse	PMID:11588182
Biological Process	GO:0007417	central nervous system development	msi1b	IMP	ZFIN:ZDB-MRPHLNO-120614-1	Zfish	PMID:22429745
Biological Process	GO:0007417	central nervous system development	msi1b	IMP	ZFIN:ZDB-MRPHLNO-120614-2	Zfish	PMID:22429745
Biological Process	GO:0030855	epithelial cell differentiation	Msi1	IEP		Rat	PMID:16360154|RGD:1582662
Biological Process	GO:0009725	response to hormone	Msi1	IMP		Rat	PMID:12093154|RGD:1582665

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern