Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MATN3
  • Mouse genes Matn3
  • Rat genes Matn3
  • Zfish genes matn3a,matn3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Matn3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	MATN3	IPI	UniProtKB:P49747	Human	PMID:15075323
Molecular Function	GO:0005515	protein binding	MATN3	IPI	UniProtKB:P13667	Human	PMID:16287128
Molecular Function	GO:0005515	protein binding	MATN3	IPI	UniProtKB:P13667	Human	PMID:23956175
Molecular Function	GO:0005515	protein binding	MATN3	IPI	UniProtKB:P15884	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MATN3	IPI	UniProtKB:P60410	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MATN3	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MATN3	IPI	UniProtKB:P15884-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MATN3	IPI	UniProtKB:Q0VD86	Human	PMID:32296183
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Matn3	IDA		Mouse	MGI:MGI:1353153|PMID:10660556
Cellular Component	GO:0031012	extracellular matrix	Matn3	IDA		Mouse	PMID:11102754
Cellular Component	GO:0120216	matrilin complex	Matn3	IPI		Mouse	MGI:MGI:1353153|PMID:10660556
Biological Process	GO:0051216	cartilage development	Matn3	IMP	MGI:MGI:3759029	Mouse	PMID:23951406
Biological Process	GO:0030198	extracellular matrix organization	Matn3	IDA		Mouse	MGI:MGI:1353153|PMID:10660556

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern