Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LYL1
  • Mouse genes Lyl1
  • Rat genes Lyl1
  • Zfish genes lyl1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lyl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	LYL1	IDA		Human	PMID:18160048
Molecular Function	GO:0005515	protein binding	LYL1	IPI	UniProtKB:P19838	Human	PMID:10023675
Molecular Function	GO:0005515	protein binding	LYL1	IPI	UniProtKB:P16220	Human	PMID:18160048
Molecular Function	GO:0005515	protein binding	LYL1	IPI	UniProtKB:Q09472	Human	PMID:18160048
Biological Process	GO:0030183	B cell differentiation	Lyl1	IMP		Mouse	MGI:MGI:3693935|PMID:16514064
Biological Process	GO:0001955	blood vessel maturation	LYL1	IMP		Human	PMID:20418284
Biological Process	GO:0060216	definitive hemopoiesis	Lyl1	IMP		Mouse	MGI:MGI:3693935|PMID:16514064
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	LYL1	IDA		Human	PMID:18160048
Biological Process	GO:0006355	regulation of DNA-templated transcription	LYL1	IDA		Human	PMID:10023675

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern