Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LRPPRC
  • Mouse genes Lrpprc
  • Rat genes Lrpprc
  • Zfish genes lrpprc
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lrpprc

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0048487	beta-tubulin binding	LRPPRC	IDA		Human	PMID:12762840
Molecular Function	GO:0005515	protein binding	LRPPRC	IPI	UniProtKB:Q66K74	Human	PMID:15907802
Molecular Function	GO:0005515	protein binding	LRPPRC	IPI	UniProtKB:Q9UBK2	Human	PMID:17050673
Molecular Function	GO:0005515	protein binding	LRPPRC	IPI	UniProtKB:P06730	Human	PMID:19262567
Molecular Function	GO:0005515	protein binding	LRPPRC	IPI	UniProtKB:Q9GZT3	Human	PMID:22045337
Molecular Function	GO:0005515	protein binding	LRPPRC	IPI	UniProtKB:P05067	Human	PMID:25959826
Molecular Function	GO:0005515	protein binding	LRPPRC	IPI	UniProtKB:Q9GZT3	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	Lrpprc	IPI	UniProtKB:O70343	Mouse	MGI:MGI:3689757|PMID:17050673
Molecular Function	GO:0005515	protein binding	Lrpprc	IPI	UniProtKB:Q9R1E0	Mouse	MGI:MGI:3689757|PMID:17050673
Molecular Function	GO:0003723	RNA binding	LRPPRC	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	LRPPRC	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	Lrpprc	IDA		Mouse	PMID:21880015
Molecular Function	GO:0003697	single-stranded DNA binding	Lrpprc	IDA		Mouse	PMID:12071956
Molecular Function	GO:0031625	ubiquitin protein ligase binding	LRPPRC	IPI	UniProtKB:O60260	Human	PMID:19725078
Cellular Component	GO:0000794	condensed nuclear chromosome	LRPPRC	IDA		Human	PMID:12762840
Cellular Component	GO:0005737	cytoplasm	Lrpprc	IDA		Mouse	PMID:12071956
Cellular Component	GO:0005856	cytoskeleton	LRPPRC	IDA		Human	PMID:12762840
Cellular Component	GO:0016020	membrane	LRPPRC	HDA		Human	PMID:19946888
Cellular Component	GO:0005874	microtubule	LRPPRC	IDA		Human	PMID:21525035
Cellular Component	GO:0042645	mitochondrial nucleoid	LRPPRC	IDA		Human	PMID:18063578
Cellular Component	GO:0005739	mitochondrion	LRPPRC	IDA		Human	PMID:12762840
Cellular Component	GO:0005739	mitochondrion	LRPPRC	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	LRPPRC	IDA		Human	PMID:12832482
Cellular Component	GO:0005739	mitochondrion	Lrpprc	IDA		Mouse	MGI:MGI:2682130|PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Lrpprc	IMP	MGI:MGI:3857306	Mouse	MGI:MGI:5301479|PMID:21880015
Cellular Component	GO:0005739	mitochondrion	Lrpprc	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Lrpprc	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Lrpprc	IDA		Mouse	PMID:22045337
Cellular Component	GO:0005634	nucleus	LRPPRC	IDA		Human	PMID:12762840
Cellular Component	GO:0005634	nucleus	LRPPRC	IDA		Human	PMID:12832482
Cellular Component	GO:0005634	nucleus	Lrpprc	IDA		Mouse	PMID:12071956
Cellular Component	GO:0048471	perinuclear region of cytoplasm	LRPPRC	IDA		Human	PMID:12762840
Cellular Component	GO:1990904	ribonucleoprotein complex	Lrpprc	IDA		Mouse	PMID:22045337
Biological Process	GO:0000957	mitochondrial RNA catabolic process	Lrpprc	IMP	MGI:MGI:5438913	Mouse	PMID:22045337
Biological Process	GO:0000957	mitochondrial RNA catabolic process	Lrpprc	IMP	MGI:MGI:3857306	Mouse	PMID:21880015
Biological Process	GO:0000961	negative regulation of mitochondrial RNA catabolic process	Lrpprc	IGI	MGI:MGI:1916394	Mouse	PMID:22045337
Biological Process	GO:0000961	negative regulation of mitochondrial RNA catabolic process	Lrpprc	IMP	MGI:MGI:3857306	Mouse	PMID:21880015
Biological Process	GO:0000961	negative regulation of mitochondrial RNA catabolic process	Lrpprc	IMP	MGI:MGI:5438913	Mouse	PMID:22045337
Biological Process	GO:0070129	regulation of mitochondrial translation	Lrpprc	IMP	MGI:MGI:5438913	Mouse	PMID:22045337

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern