Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LIN7B
  • Mouse genes Lin7b
  • Rat genes Lin7b
  • Zfish genes lin7b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lin7b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030165	PDZ domain binding	Lin7b	IDA		Rat	PMID:14596909|RGD:8553286
Molecular Function	GO:0030165	PDZ domain binding	Lin7b	IPI	RGD:619814	Rat	PMID:14596909|RGD:8553286
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:O14936-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:P20618	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:Q13368	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:Q14168-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:Q5T2T1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:Q8N3R9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:Q8N8B7-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:Q8WVT3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:Q9BXY0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:Q9H0I2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIN7B	IPI	UniProtKB:Q9NZW5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Lin7b	IPI	PR:Q9CZN4	Mouse	PMID:24498314
Molecular Function	GO:0005515	protein binding	Lin7b	IPI	UniProtKB:Q6GMN2	Rat	PMID:14596909|RGD:8553286
Molecular Function	GO:0005515	protein binding	Lin7b	IPI	RGD:621660|RGD:620844	Rat	PMID:14960569|RGD:1304295
Molecular Function	GO:0019904	protein domain specific binding	LIN7B	IPI	UniProtKB:Q5T2T1	Human	PMID:17237226
Molecular Function	GO:0019901	protein kinase binding	Lin7b	IPI	RGD:62004	Rat	PMID:17084383|RGD:2326120
Cellular Component	GO:0005911	cell-cell junction	Lin7b	IDA		Rat	PMID:10362251|RGD:633233
Cellular Component	GO:0016020	membrane	Lin7b	IDA		Rat	PMID:17084383|RGD:2326120
Cellular Component	GO:0005886	plasma membrane	Lin7b	IDA		Mouse	PMID:10341223
Cellular Component	GO:0045202	synapse	Lin7b	IDA		Rat	PMID:10362251|RGD:633233
Biological Process	GO:0007269	neurotransmitter secretion	Lin7b	IGI	MGI:MGI:2135609	Mouse	PMID:16186258
Biological Process	GO:0007269	neurotransmitter secretion	Lin7b	IGI	MGI:MGI:1330839	Mouse	PMID:16186258

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern