Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes JPH4
  • Mouse genes Jph4
  • Rat genes Jph4
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Jph4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	JPH4	IPI	UniProtKB:Q9UHD9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH4	IPI	UniProtKB:Q9UMX0	Human	PMID:32296183
Cellular Component	GO:0043198	dendritic shaft	Jph4	IDA		Mouse	PMID:17347645
Cellular Component	GO:0005790	smooth endoplasmic reticulum	Jph4	IDA		Mouse	PMID:17347645
Biological Process	GO:0007612	learning	Jph4	IGI	MGI:MGI:1891497	Mouse	PMID:17347645
Biological Process	GO:0050885	neuromuscular process controlling balance	Jph4	IGI	MGI:MGI:1891497	Mouse	PMID:17347645
Biological Process	GO:0001817	regulation of cytokine production	Jph4	IMP	MGI:MGI:3663386	Mouse	PMID:26929330
Biological Process	GO:2001256	regulation of store-operated calcium entry	Jph4	IMP	MGI:MGI:3663386	Mouse	PMID:26929330
Biological Process	GO:0048167	regulation of synaptic plasticity	Jph4	IGI	MGI:MGI:1891497	Mouse	PMID:17347645

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern