Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes IGSF11
  • Mouse genes Igsf11
  • Rat genes Igsf11
  • Zfish genes igsf11
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Igsf11

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035255	ionotropic glutamate receptor binding	IGSF11	IPI	UniProtKB:P19490	Human	PMID:26595655
Molecular Function	GO:0035255	ionotropic glutamate receptor binding	IGSF11	IPI	UniProtKB:P19491	Human	PMID:26595655
Molecular Function	GO:0035255	ionotropic glutamate receptor binding	Igsf11	IPI	UniProtKB:P19490	Rat	PMID:16108831|RGD:13825438
Molecular Function	GO:0035255	ionotropic glutamate receptor binding	Igsf11	IPI	UniProtKB:P19491	Rat	PMID:16108831|RGD:13825438
Molecular Function	GO:0035255	ionotropic glutamate receptor binding	Igsf11	IPI	UniProtKB:P19490	Rat	PMID:26595655|RGD:11085699
Molecular Function	GO:0035255	ionotropic glutamate receptor binding	Igsf11	IPI	UniProtKB:P19491	Rat	PMID:26595655|RGD:11085699
Molecular Function	GO:0005515	protein binding	IGSF11	IPI	UniProtKB:P31016	Human	PMID:26595655
Molecular Function	GO:0005515	protein binding	Igsf11	IPI	UniProtKB:P31016	Rat	PMID:16108831|RGD:13825438
Molecular Function	GO:0005515	protein binding	Igsf11	IPI	UniProtKB:P31016	Rat	PMID:26595655|RGD:11085699
Cellular Component	GO:0005911	cell-cell junction	IGSF11	IDA		Human	PMID:26595655
Cellular Component	GO:0060076	excitatory synapse	Igsf11	IMP		Rat	PMID:26595655|RGD:11085699
Cellular Component	GO:0014069	postsynaptic density	Igsf11	IDA		Rat	PMID:26595655|RGD:11085699
Biological Process	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	IGSF11	IMP		Human	PMID:15795899
Biological Process	GO:0050934	late stripe melanocyte differentiation	igsf11	IMP	ZFIN:ZDB-GENO-120905-1	Zfish	PMID:22916035
Biological Process	GO:0050934	late stripe melanocyte differentiation	igsf11	IMP	ZFIN:ZDB-GENO-120928-4	Zfish	PMID:22916035
Biological Process	GO:0050934	late stripe melanocyte differentiation	igsf11	IMP	ZFIN:ZDB-GENO-120928-5	Zfish	PMID:22916035
Biological Process	GO:0045185	maintenance of protein location	Igsf11	IMP		Rat	PMID:26595655|RGD:11085699
Biological Process	GO:0097324	melanocyte migration	igsf11	IMP	ZFIN:ZDB-GENO-120905-1	Zfish	PMID:22916035
Biological Process	GO:1900273	positive regulation of long-term synaptic potentiation	Igsf11	IMP		Mouse	MGI:MGI:5790016|PMID:26595655
Biological Process	GO:0061885	positive regulation of mini excitatory postsynaptic potential	Igsf11	IMP		Rat	PMID:26595655|RGD:11085699
Biological Process	GO:0048167	regulation of synaptic plasticity	Igsf11	IMP		Mouse	MGI:MGI:5790016|PMID:26595655

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern