Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes IFT43
  • Mouse genes Ift43
  • Rat genes Ift43
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ift43

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	IFT43	IPI	UniProtKB:O75800	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	IFT43	IPI	UniProtKB:P25791	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	IFT43	IPI	UniProtKB:Q9P2L0	Human	PMID:27932497
Molecular Function	GO:0005515	protein binding	IFT43	IPI	UniProtKB:Q9HBG6,UniProtKB:Q9P2L0	Human	PMID:29220510
Cellular Component	GO:0034451	centriolar satellite	IFT43	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005814	centriole	Ift43	IDA		Mouse	PMID:29038301
Cellular Component	GO:0005929	cilium	IFT43	IDA		Human	PMID:27932497
Cellular Component	GO:0005929	cilium	Ift43	IDA		Mouse	MGI:MGI:5787768|PMID:25243405
Cellular Component	GO:0030991	intraciliary transport particle A	IFT43	IPI		Human	PMID:27173435
Cellular Component	GO:0030991	intraciliary transport particle A	IFT43	IDA		Human	PMID:20889716
Cellular Component	GO:0030991	intraciliary transport particle A	IFT43	IDA		Human	PMID:27932497
Cellular Component	GO:0030991	intraciliary transport particle A	Ift43	IDA		Mouse	PMID:20889716
Cellular Component	GO:0015630	microtubule cytoskeleton	IFT43	IDA		Human	GO_REF:0000052
Biological Process	GO:0060271	cilium assembly	IFT43	IMP		Human	PMID:21378380
Biological Process	GO:0035721	intraciliary retrograde transport	IFT43	IMP		Human	PMID:21378380

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern