About   Help   FAQ
Ift43
Gene Detail
Symbol

Name
ID
Ift43
intraflagellar transport 43
MGI:1923661
Synonyms
1700019E19Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 12
40.16 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:86082561-86162458 bp, + strand
From Ensembl annotation of GRCm38

  79898 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12641  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Gene Tree: Ift43

Human
homologs
Human Homolog IFT43, intraflagellar transport 43
NCBI Gene ID 112752
neXtProt AC  NX_Q96FT9
Human Synonyms  C14orf179, CED3
Human Chr (Location)  14q24.3; chr14:75985753-76084073 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human IFT43
Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(5) Targeted(3)
Incidental mutations (data from APF )
Interactions
Ift43 interacts with 21 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process cell projection organization, cilium morphogenesis, ...
Component cell, cilium, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(55)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(55) cDNA(55)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000007867 (Evidence)
Entrez Gene76411 (Evidence)
UniGene292345
DFCITC1580684, TC1592753
DoTSDT.533120, DT.55151249, DT.94402287
NIA Mouse Gene IndexU014216
Consensus CDS ProjectCCDS26064.1
International Mouse Knockout Project StatusIft43
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000007867 Ensembl Gene Model | MGI Sequence Detail 79898 C57BL/6J ±  kb
transcript ENSMUST00000054565 Ensembl | MGI Sequence Detail 775 Not Applicable 
polypeptide ENSMUSP00000061891 Ensembl | MGI Sequence Detail 195 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(6) UniProt(1)
Polymorphisms
SNPs within 2kb(346 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000032778 intraflagellar transport protein 43 homolog
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(32)
Other
accession IDs
MGI:2145134

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/09/2014
MGI 5.20
The Jackson Laboratory