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Ift43 Gene Detail
Summary
  • Symbol
    Ift43
  • Name
    intraflagellar transport 43
  • Synonyms
    1700019E19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923661
    NCBI Gene: 76411
Location & Maps
more
  • Sequence Map
    Chr12:86082561-86162458 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      79898 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 40.16 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    IFT43, intraflagellar transport 43
  • Vertebrate Orthologs
    8
  • Human Ortholog
    IFT43, intraflagellar transport 43
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C14orf179, CED3
  • Links
    NCBI Gene ID: 112752
    neXtProt AC: NX_Q96FT9

  • Chr Location
    14q24.3; chr14:75985753-76084073 (+)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human IFT43 associations

Human Disease Mouse Models
       Cranioectodermal Dysplasia 3; CED3   OMIM: 614099
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    1
  • Gene trapped
    5
  • Targeted
    4
  • Genomic Mutations
    1 involving Ift43
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000007867 Ensembl Gene Model | MGI Sequence Detail 79898 C57BL/6J ±  kb
transcript ENSMUST00000054565 Ensembl | MGI Sequence Detail 775 Not Applicable  
polypeptide ENSMUSP00000061891 Ensembl | MGI Sequence Detail 195 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    346 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000032778 intraflagellar transport protein 43 homolog
  • InterPro Domains
    IPR029302 Intraflagellar transport protein 43
Molecular
Reagents
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  • All nucleic 55
    cDNA 55

    Microarray probesets 3
Other
Accession IDs
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MGI:2145134
References
more
  • Summaries
    All 30
    Gene Ontology 4
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory