Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes IBSP
  • Mouse genes Ibsp
  • Rat genes Ibsp
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ibsp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005178	integrin binding	IBSP	IMP		Human	PMID:24103036
Molecular Function	GO:0005515	protein binding	IBSP	IPI	UniProtKB:P05106,UniProtKB:P06756	Human	PMID:10747989
Molecular Function	GO:0005515	protein binding	IBSP	IPI	UniProtKB:Q14802-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	IBSP	IPI	UniProtKB:Q8IZU0	Human	PMID:32296183
Molecular Function	GO:0036094	small molecule binding	IBSP	IPI	ChEBI:52254	Human	PMID:9258751
Cellular Component	GO:0005615	extracellular space	Ibsp	IDA		Rat	PMID:18758911|RGD:2301841
Cellular Component	GO:0016020	membrane	IBSP	HDA		Human	PMID:16210410
Cellular Component	GO:0031982	vesicle	Ibsp	IDA		Rat	PMID:18758911|RGD:2301841
Biological Process	GO:0030282	bone mineralization	Ibsp	IMP	MGI:MGI:3796255	Mouse	PMID:25464126
Biological Process	GO:0007155	cell adhesion	Ibsp	IMP		Rat	PMID:3198635|RGD:729270
Biological Process	GO:0071363	cellular response to growth factor stimulus	Ibsp	IDA		Mouse	PMID:7848824
Biological Process	GO:0030198	extracellular matrix organization	Ibsp	IDA		Mouse	PMID:18757743
Biological Process	GO:0001649	osteoblast differentiation	IBSP	HDA		Human	PMID:16210410
Biological Process	GO:0045785	positive regulation of cell adhesion	IBSP	IMP		Human	PMID:24103036

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern