Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HOXB2
  • Mouse genes Hoxb2
  • Rat genes Hoxb2
  • Zfish genes hoxb2a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hoxb2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	HOXB2	IDA		Human	PMID:15289435
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q9H2K2	Human	PMID:12080061
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q9H2K2	Human	PMID:22153077
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q06455-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q6PF18	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q86UW9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q86VK4-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q8TF42	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q9BYU1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q9UHB4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q9UJV3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB2	IPI	UniProtKB:Q9H2K2	Human	PMID:35016035
Molecular Function	GO:0043565	sequence-specific DNA binding	HOXB2	IDA		Human	PMID:23332764
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	HOXB2	IDA		Human	PMID:28473536
Cellular Component	GO:0005654	nucleoplasm	HOXB2	IDA		Human	GO_REF:0000052
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb2	IGI	MGI:MGI:96185	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb2	IGI	MGI:MGI:96188	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb2	IMP	MGI:MGI:2151772	Mouse	PMID:9012503
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb2	IGI	MGI:MGI:96184	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb2	IGI	MGI:MGI:96189	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb2	IGI	MGI:MGI:96190	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb2	IGI	MGI:MGI:96186	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb2	IGI	MGI:MGI:96185	Mouse	PMID:9012503
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb2	IGI	MGI:MGI:96187	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb2	IGI	MGI:MGI:96182	Mouse	PMID:10885747
Biological Process	GO:0009953	dorsal/ventral pattern formation	Hoxb2	IGI	MGI:MGI:96174	Mouse	PMID:10230789
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb2	IGI	MGI:MGI:96186	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb2	IGI	MGI:MGI:96190	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb2	IGI	MGI:MGI:96187	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb2	IGI	MGI:MGI:96182	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb2	IGI	MGI:MGI:96185	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb2	IGI	MGI:MGI:96188	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb2	IGI	MGI:MGI:96184	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb2	IGI	MGI:MGI:96189	Mouse	PMID:10885747
Biological Process	GO:0021612	facial nerve structural organization	Hoxb2	IMP	MGI:MGI:2151772	Mouse	PMID:9012503
Biological Process	GO:0002011	morphogenesis of an epithelial sheet	Hoxb2	IGI	MGI:MGI:96185	Mouse	PMID:11518511
Biological Process	GO:0048857	neural nucleus development	Hoxb2	IMP	MGI:MGI:2151772	Mouse	PMID:9012503
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	HOXB2	IDA		Human	PMID:15289435
Biological Process	GO:0021569	rhombomere 3 development	Hoxb2	IGI	MGI:MGI:96174	Mouse	PMID:10230789
Biological Process	GO:0021570	rhombomere 4 development	Hoxb2	IGI	MGI:MGI:96174	Mouse	PMID:10230789
Biological Process	GO:0048705	skeletal system morphogenesis	Hoxb2	IMP	MGI:MGI:2151772	Mouse	PMID:9012503
Biological Process	GO:0048705	skeletal system morphogenesis	Hoxb2	IGI	MGI:MGI:96185	Mouse	PMID:9012503

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern