Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HAPLN1
  • Mouse genes Hapln1
  • Rat genes Hapln1
  • Zfish genes hapln1a,hapln1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hapln1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HAPLN1	HDA		Human	PMID:20551380
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HAPLN1	HDA		Human	PMID:23979707
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HAPLN1	HDA		Human	PMID:27068509
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HAPLN1	HDA		Human	PMID:28327460
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Hapln1	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0031012	extracellular matrix	Hapln1	IDA		Mouse	PMID:14620382
Cellular Component	GO:0045202	synapse	Hapln1	EXP		Mouse	PMID:24534009
Cellular Component	GO:0045202	synapse	Hapln1	IDA		Mouse	PMID:24534009
Biological Process	GO:0031101	fin regeneration	hapln1a	IMP	ZFIN:ZDB-MRPHLNO-140602-6	Zfish	PMID:24533114
Biological Process	GO:0031101	fin regeneration	hapln1a	IMP	ZFIN:ZDB-MRPHLNO-140602-6	Zfish	PMID:26828861
Biological Process	GO:0031101	fin regeneration	hapln1a	IGI	ZFIN:ZDB-GENE-990715-2	Zfish	PMID:26828861
Biological Process	GO:0031101	fin regeneration	hapln1a	IMP	ZFIN:ZDB-MRPHLNO-140602-5	Zfish	PMID:24533114
Biological Process	GO:0002040	sprouting angiogenesis	hapln1b	IMP	ZFIN:ZDB-MRPHLNO-090521-1	Zfish	PMID:19308258

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern