Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GTF2IRD1
  • Mouse genes Gtf2ird1
  • Rat genes Gtf2ird1
  • Zfish genes gtf2ird1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gtf2ird1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Gtf2ird1	IDA		Mouse	PMID:10861001
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	GTF2IRD1	IDA		Human	PMID:11438732
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:P51860	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q13835	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q58WW2	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q6VMQ6	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q80W88	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q8WWY6	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q96CB8	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q9CWY3	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q9JLM4	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q9UBW7	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q96HT8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GTF2IRD1	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	GTF2IRD1	IDA		Human	PMID:9774679
Cellular Component	GO:0005829	cytosol	GTF2IRD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	GTF2IRD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Gtf2ird1	IDA		Mouse	PMID:22899722
Biological Process	GO:0009790	embryo development	Gtf2ird1	IMP	MGI:MGI:3831526	Mouse	PMID:19109438
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	GTF2IRD1	IDA		Human	PMID:11438732
Biological Process	GO:0014886	transition between slow and fast fiber	Gtf2ird1	IDA		Mouse	PMID:22899722

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern