Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GPBP1
  • Mouse genes Gpbp1
  • Rat genes Gpbp1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gpbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Gpbp1	IDA		Mouse	PMID:14612417
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Gpbp1	IDA		Mouse	PMID:14612417
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q96EZ8	Human	PMID:19060904
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q9BVV2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q9H8W4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q5ZXN6	Human	PMID:29433439
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q9BVV2	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q9BVV2	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:O75031	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:P20618	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:P47897	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:P63244	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q15014	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q2TAC2-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q3B820	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q96EZ8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q99633	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q9BVV2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GPBP1	IPI	UniProtKB:Q9UBU9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Gpbp1	IPI	PR:P08775	Mouse	PMID:14612417
Molecular Function	GO:0005515	protein binding	Gpbp1	IPI	PR:P62915	Mouse	PMID:14612417
Molecular Function	GO:0005515	protein binding	Gpbp1	IPI	PR:P45481	Mouse	PMID:14612417
Molecular Function	GO:0005515	protein binding	Gpbp1	IPI	PR:P29037	Mouse	PMID:14612417
Molecular Function	GO:0005515	protein binding	Gpbp1	IPI	MGI:MGI:1915955	Mouse	PMID:14612417
Cellular Component	GO:0005829	cytosol	GPBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	GPBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Gpbp1	IDA		Mouse	PMID:14612417
Cellular Component	GO:0005886	plasma membrane	GPBP1	IDA		Human	GO_REF:0000052
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Gpbp1	IDA		Mouse	PMID:14612417

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern