Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GNAT2
  • Mouse genes Gnat2
  • Rat genes Gnat2
  • Zfish genes gnat2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gnat2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0001917	photoreceptor inner segment	GNAT2	IDA		Human	PMID:2534964
Cellular Component	GO:0001917	photoreceptor inner segment	Gnat2	IDA		Rat	PMID:17591908|RGD:2302146
Cellular Component	GO:0001750	photoreceptor outer segment	GNAT2	IDA		Human	PMID:2534964
Cellular Component	GO:0001750	photoreceptor outer segment	Gnat2	IDA		Rat	PMID:17591908|RGD:2302146
Biological Process	GO:0001580	detection of chemical stimulus involved in sensory perception of bitter taste	Gnat2	IDA		Rat	PMID:12917372|RGD:1599039
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	GNAT2	IMP		Human	PMID:12077706
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	Gnat2	IMP	MGI:MGI:3588845	Mouse	PMID:17065522
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	gnat2	IMP	ZFIN:ZDB-GENO-030903-1	Zfish	PMID:12533607
Biological Process	GO:0007186	G protein-coupled receptor signaling pathway	Gnat2	IDA		Rat	PMID:12917372|RGD:1599039
Biological Process	GO:0007602	phototransduction	Gnat2	IMP	MGI:MGI:3588845	Mouse	PMID:18171936
Biological Process	GO:0007602	phototransduction	Gnat2	IMP	MGI:MGI:3588845	Mouse	PMID:17408617
Biological Process	GO:0007204	positive regulation of cytosolic calcium ion concentration	Gnat2	IDA		Rat	PMID:12917372|RGD:1599039
Biological Process	GO:0009642	response to light intensity	Gnat2	IDA		Rat	PMID:17591908|RGD:2302146
Biological Process	GO:0046549	retinal cone cell development	Gnat2	IMP	MGI:MGI:3588845	Mouse	PMID:21052544
Biological Process	GO:0046549	retinal cone cell development	Gnat2	IMP	MGI:MGI:3588845	Mouse	PMID:17065522
Biological Process	GO:0007601	visual perception	Gnat2	IMP	MGI:MGI:3588845	Mouse	PMID:17515894

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern