Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GABPB2
  • Mouse genes Gabpb2
  • Rat genes Gabpb2
  • Zfish genes gabpb2a,gabpb2b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gabpb2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	Gabpb2	IPI	PR:P81069	Mouse	PMID:7958862
Molecular Function	GO:0005515	protein binding	GABPB2	IPI	UniProtKB:Q9H8Y8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GABPB2	IPI	UniProtKB:Q06546	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	GABPB2	IPI	UniProtKB:P08579	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GABPB2	IPI	UniProtKB:Q06546	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GABPB2	IPI	UniProtKB:Q08AM6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GABPB2	IPI	UniProtKB:Q17RB8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GABPB2	IPI	UniProtKB:Q8NCE0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GABPB2	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GABPB2	IPI	UniProtKB:P21333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	GABPB2	IPI	UniProtKB:Q8N2W9	Human	PMID:32814053
Molecular Function	GO:0000976	transcription cis-regulatory region binding	GABPB2	IDA		Human	PMID:9857059
Cellular Component	GO:0005634	nucleus	GABPB2	IDA		Human	PMID:9857059
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	GABPB2	IDA		Human	PMID:9857059

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern