Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FERD3L
  • Mouse genes Ferd3l
  • Rat genes Ferd3l
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ferd3l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	Ferd3l	IDA		Mouse	MGI:MGI:2386136|PMID:12217327
Molecular Function	GO:0005515	protein binding	FERD3L	IPI	UniProtKB:O15481	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FERD3L	IPI	UniProtKB:O43765	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FERD3L	IPI	UniProtKB:P15884	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FERD3L	IPI	UniProtKB:Q8IZU0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FERD3L	IPI	UniProtKB:P15884	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	FERD3L	IPI	UniProtKB:Q8IZU0	Human	PMID:31515488
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Ferd3l	IDA		Mouse	MGI:MGI:2386136|PMID:12217327
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	FERD3L	IDA		Human	PMID:28473536
Cellular Component	GO:0005634	nucleus	Ferd3l	IDA		Mouse	MGI:MGI:2386136|PMID:12217327
Biological Process	GO:0048468	cell development	Ferd3l	IMP	MGI:MGI:4460989	Mouse	PMID:20460368
Biological Process	GO:0033504	floor plate development	Ferd3l	IMP	MGI:MGI:4460989	Mouse	PMID:20460368
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Ferd3l	IMP		Mouse	MGI:MGI:2386136|PMID:12217327
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Ferd3l	IDA		Mouse	MGI:MGI:2386136|PMID:12217327
Biological Process	GO:1904338	regulation of dopaminergic neuron differentiation	Ferd3l	IMP	MGI:MGI:4460989	Mouse	PMID:20460368
Biological Process	GO:0050767	regulation of neurogenesis	Ferd3l	IMP	MGI:MGI:4460989	Mouse	PMID:20460368

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern