Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FBXL21P
  • Mouse genes Fbxl21
  • Rat genes Fbxl21
  • Zfish genes fbxl3l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fbxl21

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Fbxl21	IPI	UniProtKB:P97784	Mouse	MGI:MGI:5470183|PMID:23452855
Molecular Function	GO:0005515	protein binding	Fbxl21	IPI	UniProtKB:P97784|UniProtKB:Q9R194	Mouse	MGI:MGI:5487698|PMID:23452856
Molecular Function	GO:0005515	protein binding	Fbxl21	IPI	UniProtKB:P97784	Mouse	MGI:MGI:5487698|PMID:23452856
Molecular Function	GO:0005515	protein binding	Fbxl21	IPI	UniProtKB:P63208|UniProtKB:Q13616	Mouse	MGI:MGI:5487698|PMID:23452856
Molecular Function	GO:0005515	protein binding	Fbxl21	IPI	UniProtKB:Q9R194	Mouse	MGI:MGI:5470183|PMID:23452855
Molecular Function	GO:0005515	protein binding	Fbxl21	IPI	UniProtKB:P97784|UniProtKB:Q9R194	Mouse	MGI:MGI:5470183|PMID:23452855
Molecular Function	GO:0005515	protein binding	Fbxl21	IPI	UniProtKB:P63208|UniProtKB:Q13616	Mouse	MGI:MGI:5470183|PMID:23452855
Molecular Function	GO:0005515	protein binding	Fbxl21	IPI	UniProtKB:Q9R194	Mouse	MGI:MGI:5487698|PMID:23452856
Cellular Component	GO:0005829	cytosol	Fbxl21	IDA		Mouse	MGI:MGI:5487698|PMID:23452856
Cellular Component	GO:0005829	cytosol	Fbxl21	IDA		Mouse	MGI:MGI:5470183|PMID:23452855
Cellular Component	GO:0005634	nucleus	Fbxl21	IDA		Mouse	MGI:MGI:5487698|PMID:23452856
Cellular Component	GO:0005634	nucleus	Fbxl21	IDA		Mouse	MGI:MGI:5470183|PMID:23452855
Cellular Component	GO:0019005	SCF ubiquitin ligase complex	Fbxl21	IDA		Mouse	MGI:MGI:5487698|PMID:23452856
Cellular Component	GO:0019005	SCF ubiquitin ligase complex	Fbxl21	IDA		Mouse	MGI:MGI:5470183|PMID:23452855
Biological Process	GO:0043153	entrainment of circadian clock by photoperiod	Fbxl21	IMP		Mouse	MGI:MGI:5487698|PMID:23452856
Biological Process	GO:0043153	entrainment of circadian clock by photoperiod	Fbxl21	IMP		Mouse	MGI:MGI:5470183|PMID:23452855
Biological Process	GO:0016567	protein ubiquitination	Fbxl21	IDA		Mouse	MGI:MGI:5470183|PMID:23452855
Biological Process	GO:0016567	protein ubiquitination	Fbxl21	IDA		Mouse	MGI:MGI:5487698|PMID:23452856

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern