Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FASTKD2
  • Mouse genes Fastkd2
  • Rat genes Fastkd2
  • Zfish genes fastkd2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fastkd2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	FASTKD2	IPI	UniProtKB:P13473-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FASTKD2	IPI	UniProtKB:Q9Y371	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	FASTKD2	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	FASTKD2	HDA		Human	PMID:22681889
Molecular Function	GO:0019843	rRNA binding	FASTKD2	IDA		Human	PMID:25683715
Cellular Component	GO:0042645	mitochondrial nucleoid	FASTKD2	IDA		Human	PMID:25683715
Cellular Component	GO:0005739	mitochondrion	FASTKD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	FASTKD2	IDA		Human	PMID:18771761
Cellular Component	GO:0005739	mitochondrion	FASTKD2	IDA		Human	PMID:20869947
Cellular Component	GO:0005739	mitochondrion	Fastkd2	HDA		Mouse	PMID:18614015
Cellular Component	GO:0035770	ribonucleoprotein granule	FASTKD2	IDA		Human	PMID:25683715
Biological Process	GO:0006915	apoptotic process	FASTKD2	IMP		Human	PMID:18771761
Biological Process	GO:1902775	mitochondrial large ribosomal subunit assembly	FASTKD2	IMP		Human	PMID:25683715
Biological Process	GO:0032543	mitochondrial translation	FASTKD2	IDA		Human	PMID:26370583
Biological Process	GO:0070131	positive regulation of mitochondrial translation	FASTKD2	IMP		Human	PMID:27667664
Biological Process	GO:0006396	RNA processing	FASTKD2	IDA		Human	PMID:26370583

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern