About   Help   FAQ
Fastkd2
Gene Detail
Symbol

Name
ID
Fastkd2
FAST kinase domains 2
MGI:1922869
Synonyms
2810421I24Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 1
32.31 cM, cytoband C2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:63730614-63754655 bp, + strand
From VEGA annotation of GRCm38

  24042 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8957  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: FASTKD2
Gene Tree: Fastkd2

Human
homologs
FASTKD2, FAST kinase domains 2
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 22868
neXtProt AC: NX_Q9NYY8

Human Synonyms: KIAA0971

Human Chr (Location): 2q33.3; chr2:206765388-206796189 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human FASTKD2

Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(5) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Fastkd2 interacts with 297 markers (Mir7-1, Mir10a, Mir15a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process cellular respiration, mitochondrial large ribosomal subunit assembly
Component mitochondrial nucleoid, mitochondrion, ...
Function poly(A) RNA binding, protein kinase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (118)    Tissues (14)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 118
cDNA source data(64)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase fastkd2    NEW 
Molecular
reagents
All nucleic(64) cDNA(64)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000013921 (Evidence)
Ensembl Gene Model ENSMUSG00000025962 (Evidence)
Entrez Gene 75619 (Evidence)
UniGene 30965
DFCI TC1576086, TC1618942, TC1680946
DoTS DT.101383046, DT.101383047, DT.101736625, DT.488592, DT.94377092, DT.97383154
NIA Mouse Gene Index U000371
Consensus CDS Project CCDS15001.1
International Mouse Phenotyping Consortium Status Fastkd2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000013921 VEGA Gene Model | MGI Sequence Detail 24042 C57BL/6J ±  kb
transcript OTTMUST00000033153 VEGA | MGI Sequence Detail 4486 Not Applicable 
polypeptide OTTMUSP00000014826 VEGA | MGI Sequence Detail 689 Not Applicable 

For the selected sequences
All sequences(51) RefSeq(4) UniProt(1)
Polymorphisms
SNPs within 2kb(149 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR010622 FAST kinase leucine-rich
InterPro IPR013579 FAST kinase-like protein, subdomain 2
InterPro IPR013584 RAP domain
Protein Ontology PR:000029106 FAST kinase domain-containing protein 2
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/25/2015
MGI 6.0
The Jackson Laboratory