Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes EPDR1
  • Mouse genes Epdr1
  • Rat genes Epdr1
  • Zfish genes epdr1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Epdr1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:1905573	ganglioside GM1 binding	EPDR1	IDA		Human	PMID:30729188
Molecular Function	GO:0042802	identical protein binding	EPDR1	IDA		Human	PMID:30729188
Molecular Function	GO:0005543	phospholipid binding	EPDR1	IPI	CHEBI:60815	Human	PMID:30729188
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:O76011	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:P24592	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:P49639	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:P60410	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:Q15323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:Q15654	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:Q52LG2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:Q63HR2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:Q6UY14-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:Q8IYS1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:Q96KQ7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EPDR1	IPI	UniProtKB:Q9BYQ6	Human	PMID:32296183
Cellular Component	GO:0005576	extracellular region	EPDR1	IDA		Human	PMID:30729188
Cellular Component	GO:0005764	lysosome	EPDR1	IDA		Human	PMID:30729188
Cellular Component	GO:0005764	lysosome	Epdr1	IDA		Mouse	PMID:16954209
Cellular Component	GO:0005764	lysosome	Epdr1	IDA		Mouse	PMID:29514215
Biological Process	GO:1990764	myofibroblast contraction	EPDR1	IMP		Human	PMID:27245865

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern