Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ECPAS
  • Mouse genes Ecpas
  • Rat genes Ecpas
  • Zfish genes ecpas
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ecpas

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070628	proteasome binding	ECPAS	IDA		Human	PMID:15496406
Molecular Function	GO:0005515	protein binding	ECPAS	IPI	UniProtKB:Q6RW13	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ECPAS	IPI	UniProtKB:Q96DZ9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ECPAS	IPI	UniProtKB:Q6RW13-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ECPAS	IPI	UniProtKB:Q6ZPD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ECPAS	IPI	UniProtKB:Q7Z5P4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ECPAS	IPI	UniProtKB:Q8WZ55	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ECPAS	IPI	UniProtKB:Q969L2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ECPAS	IPI	UniProtKB:Q96DZ9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ECPAS	IPI	UniProtKB:Q9NX76	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ECPAS	IPI	UniProtKB:Q9UBN6	Human	PMID:32296183
Cellular Component	GO:0005813	centrosome	ECPAS	IDA		Human	PMID:15496406
Cellular Component	GO:0030134	COPII-coated ER to Golgi transport vesicle	ECPAS	IDA		Human	PMID:15496406
Cellular Component	GO:0031410	cytoplasmic vesicle	ECPAS	IDA		Human	PMID:15496406
Cellular Component	GO:0005769	early endosome	ECPAS	IDA		Human	PMID:15496406
Cellular Component	GO:0030139	endocytic vesicle	ECPAS	IDA		Human	PMID:20682791
Cellular Component	GO:0005783	endoplasmic reticulum	ECPAS	IDA		Human	PMID:15496406
Cellular Component	GO:0005770	late endosome	ECPAS	IDA		Human	PMID:15496406
Cellular Component	GO:0016020	membrane	ECPAS	HDA		Human	PMID:19946888
Cellular Component	GO:0005771	multivesicular body	ECPAS	IDA		Human	PMID:20682791
Cellular Component	GO:0005654	nucleoplasm	ECPAS	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	ECPAS	IDA		Human	PMID:15496406
Biological Process	GO:0030433	ubiquitin-dependent ERAD pathway	ECPAS	IMP		Human	PMID:15496406

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern