Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DYNC1I1
  • Mouse genes Dync1i1
  • Rat genes Dync1i1
  • Zfish genes dync1i1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dync1i1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045503	dynein light chain binding	Dync1i1	IPI	PR:P63168	Mouse	PMID:11148215
Molecular Function	GO:0045503	dynein light chain binding	Dync1i1	IPI	PR:P51807	Mouse	PMID:11148215
Molecular Function	GO:0008017	microtubule binding	Dync1i1	IDA		Rat	PMID:14985359|RGD:8553555
Molecular Function	GO:0003777	microtubule motor activity	Dync1i1	IDA		Rat	PMID:14985359|RGD:8553555
Molecular Function	GO:0005515	protein binding	DYNC1I1	IPI	UniProtKB:Q99614	Human	PMID:14985359
Molecular Function	GO:0005515	protein binding	DYNC1I1	IPI	UniProtKB:Q9H0B6	Human	PMID:14985359
Molecular Function	GO:0005515	protein binding	DYNC1I1	IPI	UniProtKB:Q9CZA6	Human	PMID:19927128
Molecular Function	GO:0005515	protein binding	DYNC1I1	IPI	UniProtKB:Q8TD16	Human	PMID:23664119
Molecular Function	GO:0005515	protein binding	Dync1i1	IPI	UniProtKB:Q61768	Mouse	MGI:MGI:4430931|PMID:20019668
Molecular Function	GO:0005515	protein binding	Dync1i1	IPI	UniProtKB:P42858|UniProtKB:Q61768	Mouse	MGI:MGI:6093100|PMID:17548833
Molecular Function	GO:0005515	protein binding	Dync1i1	IPI	UniProtKB:P06537	Mouse	MGI:MGI:2158896|PMID:11751894
Molecular Function	GO:0005515	protein binding	Dync1i1	IPI	UniProtKB:P63168|UniProtKB:Q64368	Mouse	MGI:MGI:5508624|PMID:16946704
Molecular Function	GO:0005515	protein binding	Dync1i1	IPI	PR:B1AXV0	Mouse	PMID:29276473
Molecular Function	GO:0005515	protein binding	Dync1i1	IPI	PR:P63005	Mouse	PMID:22073305
Molecular Function	GO:0005515	protein binding	Dync1i1	IPI	UniProtKB:Q2PQA9	Rat	PMID:14985359|RGD:8553555
Molecular Function	GO:0005515	protein binding	Dync1i1	IPI	UniProtKB:Q66H09	Rat	PMID:14985359|RGD:8553555
Molecular Function	GO:0030507	spectrin binding	DYNC1I1	IDA		Human	PMID:23704327
Cellular Component	GO:1904115	axon cytoplasm	Dync1i1	IDA		Rat	PMID:19380881|RGD:12793047
Cellular Component	GO:0005737	cytoplasm	DYNC1I1	IDA		Human	PMID:25540360
Cellular Component	GO:0005868	cytoplasmic dynein complex	Dync1i1	IDA		Rat	PMID:1387402|RGD:69826
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	DYNC1I1	IDA		Human	PMID:15121898
Cellular Component	GO:0000776	kinetochore	DYNC1I1	IDA		Human	PMID:19229290
Cellular Component	GO:0005634	nucleus	DYNC1I1	IDA		Human	PMID:25540360
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Dync1i1	IDA		Rat	PMID:14985359|RGD:8553555
Cellular Component	GO:1990257	piccolo-bassoon transport vesicle	Dync1i1	IDA		Rat	PMID:19380881|RGD:12793047
Cellular Component	GO:0055037	recycling endosome	DYNC1I1	IDA		Human	PMID:24561039
Cellular Component	GO:0000922	spindle pole	DYNC1I1	IDA		Human	PMID:19229290
Cellular Component	GO:0031982	vesicle	DYNC1I1	IDA		Human	PMID:20682791
Biological Process	GO:0007420	brain development	Dync1i1	IEP		Rat	PMID:8688562|RGD:13207404
Biological Process	GO:0047496	vesicle transport along microtubule	DYNC1I1	IMP		Human	PMID:24561039
Biological Process	GO:0047496	vesicle transport along microtubule	Dync1i1	IDA		Rat	PMID:14985359|RGD:8553555

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern