Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DSG4
  • Mouse genes Dsg4
  • Rat genes Dsg4
  • Zfish genes si:ch73-74h11.1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dsg4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	Dsg4	IMP		Rat	PMID:15081105|RGD:1302434
Cellular Component	GO:0030057	desmosome	Dsg4	IMP	MGI:MGI:1856929	Mouse	PMID:12705872
Biological Process	GO:0042640	anagen	Dsg4	IMP	MGI:MGI:1856929	Mouse	PMID:12705872
Biological Process	GO:0030509	BMP signaling pathway	Dsg4	IDA		Mouse	PMID:18692037
Biological Process	GO:0098609	cell-cell adhesion	Dsg4	IMP	MGI:MGI:1856929	Mouse	PMID:12705872
Biological Process	GO:0001942	hair follicle development	Dsg4	IDA		Mouse	PMID:18692037
Biological Process	GO:0030216	keratinocyte differentiation	Dsg4	IMP	MGI:MGI:1856929	Mouse	PMID:12705872

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern